1JW1 | pdb_00001jw1

Crystallization and structure determination of goat lactoferrin at 4.0 resolution: A new form of packing in lactoferrins with a high solvent content in crystals

• PDB DOI: https://doi.org/10.2210/pdb1JW1/pdb

• Classification: METAL BINDING PROTEIN
• Organism(s): Capra hircus
• Mutation(s): No 


• Deposited: 2001-09-02 Released: 2003-04-29 
• Deposition Author(s): Kumar, P., Yadav, S., Singh, T.P.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 4.00 Å
• R-Value Free: 
  0.328 (Depositor) 
• R-Value Work: 
  0.228 (Depositor) 

Literature

Crystallization and structure determonation of goat lactoferrin at 4.0A resolution: A new form of packing in lactoferrins with a high solvent content in crystals

Kumar, P., Yadav, S., Singh, T.P.

(2002) Indian J Biochem Biophys 39: 16-21

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 75.73 kDa 
• Atom Count: 5,295 
• Modeled Residue Count: 689 
• Deposited Residue Count: 689 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
LACTOFERRIN	A	689	Capra hircus	Mutation(s): 0  EC: 3.4.21
UniProt
Find proteins for Q29477 (Capra hircus) Explore Q29477  Go to UniProtKB:  Q29477

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
FE	B [auth A], C [auth A]	FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 4.00 Å
• R-Value Free:  0.328 (Depositor) 
• R-Value Work:  0.228 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 104.6	α = 90
b = 153.8	β = 90
c = 155.05	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
AMoRE	phasing
CNS	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 2003-04-29 
Deposition Author(s): Kumar, P., Yadav, S., Singh, T.P.

Revision History  

• Version 1.0: 2003-04-29
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2024-11-06
  Changes: Data collection, Database references, Derived calculations, Structure summary