1ZWS | pdb_00001zws

Crystal structure of the catalytic domain of human DRP-1 kinase

PDB DOI: https://doi.org/10.2210/pdb1ZWS/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2005-06-06 Released: 2006-10-24
Deposition Author(s): Kursula, P., Schunck, H., Wilmanns, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.90 Å
R-Value Free:
0.258 (Depositor), 0.223 (DCC)
R-Value Work:
0.220 (Depositor), 0.220 (DCC)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 1ZWS

This is version 1.4 of the entry. See complete history.

Literature

Crystal structure of the catalytic domain of human DRP-1 kinase

Kursula, P., Schunck, H., Wilmanns, M.

To be published.

Macromolecule Content

Total Structure Weight: 264.77 kDa
Atom Count: 18,024
Modeled Residue Count: 2,224
Deposited Residue Count: 2,304
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DAP-kinase related protein 1	A, B, C, D, E A, B, C, D, E, F, G, H	288	Homo sapiens	Mutation(s): 0 EC: 2.7.11.1
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UIK4 (Homo sapiens) Explore Q9UIK4 Go to UniProtKB: Q9UIK4
PHAROS: Q9UIK4 GTEx: ENSG00000035664
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9UIK4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.90 Å
R-Value Free: 0.258 (Depositor), 0.223 (DCC)
R-Value Work: 0.220 (Depositor), 0.220 (DCC)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 52.62	α = 90
b = 211.83	β = 101.82
c = 128.42	γ = 90

Software Package:

Software Name	Purpose
MAR345	data collection
XDS	data reduction
MOLREP	phasing
CNS	refinement
XDS	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2006-10-24

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2006-10-24
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2017-10-11
Changes: Data collection, Refinement description
Version 1.4: 2023-08-23
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.