1ZFU | pdb_00001zfu

Plectasin:A peptide antibiotic with therapeutic potential from a saprophytic fungus


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: target function 

wwPDB Validation 3D Report Full Report

Validation slider image for 1ZFU

This is version 1.4 of the entry. See complete history

Literature

Plectasin is a peptide antibiotic with therapeutic potential from a saprophytic fungus.

Mygind, P.H.Fischer, R.L.Schnorr, K.M.Hansen, M.T.Sonksen, C.P.Ludvigsen, S.Raventos, D.Buskov, S.Christensen, B.De Maria, L.Taboureau, O.Yaver, D.Elvig-Jorgensen, S.G.Sorensen, M.V.Christensen, B.E.Kjaerulff, S.Frimodt-Moller, N.Lehrer, R.I.Zasloff, M.Kristensen, H.H.

(2005) Nature 437: 975-980

  • DOI: https://doi.org/10.1038/nature04051
  • Primary Citation Related Structures: 
    1ZFU

  • PubMed Abstract: 

    Animals and higher plants express endogenous peptide antibiotics called defensins. These small cysteine-rich peptides are active against bacteria, fungi and viruses. Here we describe plectasin-the first defensin to be isolated from a fungus, the saprophytic ascomycete Pseudoplectania nigrella. Plectasin has primary, secondary and tertiary structures that closely resemble those of defensins found in spiders, scorpions, dragonflies and mussels. Recombinant plectasin was produced at a very high, and commercially viable, yield and purity. In vitro, the recombinant peptide was especially active against Streptococcus pneumoniae, including strains resistant to conventional antibiotics. Plectasin showed extremely low toxicity in mice, and cured them of experimental peritonitis and pneumonia caused by S. pneumoniae as efficaciously as vancomycin and penicillin. These findings identify fungi as a novel source of antimicrobial defensins, and show the therapeutic potential of plectasin. They also suggest that the defensins of insects, molluscs and fungi arose from a common ancestral gene.


  • Organizational Affiliation
    • Novozymes A/S, 2880 Bagsvaerd, Denmark.

Macromolecule Content 

  • Total Structure Weight: 4.42 kDa 
  • Atom Count: 305 
  • Modeled Residue Count: 40 
  • Deposited Residue Count: 40 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Plectasin40Pseudoplectania nigrellaMutation(s): 0 
UniProt
Find proteins for Q53I06 (Pseudoplectania nigrella)
Explore Q53I06 
Go to UniProtKB:  Q53I06
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ53I06
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 10 
  • Selection Criteria: target function 

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2005-10-18
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2021-10-27
    Changes: Data collection, Database references, Derived calculations
  • Version 1.4: 2024-10-30
    Changes: Data collection, Structure summary