1YXR | pdb_00001yxr

NMR Structure of VPS4A MIT Domain

PDB DOI: https://doi.org/10.2210/pdb1YXR/pdb
BMRB: 6573

Classification: PROTEIN TRAFFICKING
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2005-02-22 Released: 2005-09-06
Deposition Author(s): Scott, J.A., Gaspar, J., Stuchell, M., Alam, S., Skalicky, J., Sundquist, W.I.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

wwPDB Validation 3D Report Full Report

Validation slider image for 1YXR

This is version 1.4 of the entry. See complete history.

Literature

NMR Structure of VPS4A MIT Domain

Scott, J.A., Gaspar, J., Stuchell, M., Alam, S., Skalicky, J., Sundquist, W.I.

To be published.

Macromolecule Content

Total Structure Weight: 9.06 kDa
Atom Count: 636
Modeled Residue Count: 77
Deposited Residue Count: 77
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
vacuolar protein sorting factor 4A	A	77	Homo sapiens	Mutation(s): 0 Gene Names: 27183 EC: 3.6.4.6
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UN37 (Homo sapiens) Explore Q9UN37 Go to UniProtKB: Q9UN37
PHAROS: Q9UN37 GTEx: ENSG00000132612
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9UN37
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2005-09-06

Deposition Author(s):

Sundquist, W.I.

Revision History (Full details and data files)

Version 1.0: 2005-09-06
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-02
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-22
Changes: Data collection

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.