1WRU | pdb_00001wru

Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu

• PDB DOI: https://doi.org/10.2210/pdb1WRU/pdb

• Classification: STRUCTURAL PROTEIN
• Organism(s): Muvirus mu
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2004-10-27 Released: 2005-09-20 
• Deposition Author(s): Kondou, Y., Kitazawa, D., Takeda, S., Yamashita, E., Mizuguchi, M., Kawano, K., Tsukihara, T.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 
  0.249 (Depositor), 0.223 (DCC) 
• R-Value Work: 
  0.222 (Depositor), 0.221 (DCC) 
• R-Value Observed: 
  0.222 (Depositor) 

Literature

Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu

Kondou, Y., Kitazawa, D., Takeda, S., Yamashita, E., Mizuguchi, M., Kawano, K., Tsukihara, T.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors and generated by PISA,PQS (software)

Macromolecule Content 

• Total Structure Weight: 41.84 kDa 
• Atom Count: 2,697 
• Modeled Residue Count: 325 
• Deposited Residue Count: 379 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
43 kDa tail protein	A	379	Muvirus mu	Mutation(s): 0  Gene Names: 44
UniProt
Find proteins for P08558 (Escherichia phage Mu) Explore P08558  Go to UniProtKB:  P08558

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free:  0.249 (Depositor), 0.223 (DCC) 
• R-Value Work:  0.222 (Depositor), 0.221 (DCC) 
• R-Value Observed: 0.222 (Depositor) 

Space Group: H 3

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 126.562	α = 90
b = 126.562	β = 90
c = 64.214	γ = 120

Software Package:

Software Name	Purpose
CNS	refinement
MOSFLM	data reduction
CCP4	data scaling
SHARP	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2005-09-20 
Deposition Author(s): Kondou, Y., Kitazawa, D., Takeda, S., Yamashita, E., Mizuguchi, M., Kawano, K., Tsukihara, T.

Revision History  

• Version 1.0: 2005-09-20
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Derived calculations, Version format compliance
• Version 1.3: 2024-03-13
  Changes: Data collection, Database references