1WEP

Solution structure of PHD domain in PHF8

• PDB DOI: https://doi.org/10.2210/pdb1WEP/pdb

• Classification: DNA BINDING PROTEIN
• Organism(s): Mus musculus
• Mutation(s): No 


• Deposited: 2004-05-25 Released: 2004-11-25 
• Deposition Author(s): He, F., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Literature

Solution structure of PHD domain in protein AA017385

He, F., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Muto, Y., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 8.72 kDa 
• Atom Count: 598 
• Modelled Residue Count: 79 
• Deposited Residue Count: 79 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PHF8	A	79	Mus musculus	Mutation(s): 0  Gene Names: RIKEN cDNA 4921501E09 EC: 1.14.11.27 (UniProt), 1.14.11.65 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q80TJ7 (Mus musculus) Explore Q80TJ7  Go to UniProtKB:  Q80TJ7
IMPC:  MGI:2444341

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2004-11-25 
Deposition Author(s): He, F., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2004-11-25
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-02
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-29
  Changes: Data collection