1VCS | pdb_00001vcs

Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]

PDB DOI: https://doi.org/10.2210/pdb1VCS/pdb

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Mus musculus
Mutation(s): No

Deposited: 2004-03-10 Released: 2005-05-03
Deposition Author(s): Abe, T., Hirota, H., Tomizawa, T., Koshiba, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function

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This is version 1.4 of the entry. See complete history.

Literature

Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]

Abe, T., Hirota, H., Tomizawa, T., Koshiba, S., Kigawa, T., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 11.47 kDa
Atom Count: 799
Modeled Residue Count: 102
Deposited Residue Count: 102
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Vesicle transport through interaction with t-SNAREs homolog 1A	A	102	Mus musculus	Mutation(s): 0 Gene Names: Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200014A22 product: Vti1a (amino acid 6-94)
UniProt & NIH Common Fund Data Resources
Find proteins for O89116 (Mus musculus) Explore O89116 Go to UniProtKB: O89116
IMPC: MGI:1855699
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	O89116
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, structures with the lowest energy, target function

Structure Validation

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Entry History

Deposition Data

Released Date: 2005-05-03

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2005-05-03
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-02
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2023-12-27
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.