1VC1 | pdb_00001vc1

Crystal structure of the TM1442 protein from Thermotoga maritima, a homolog of the Bacillus subtilis general stress response anti-anti-sigma factor RsbV

PDB DOI: https://doi.org/10.2210/pdb1VC1/pdb

Classification: GENE REGULATION
Organism(s): Thermotoga maritima
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2004-03-03 Released: 2004-09-28
Deposition Author(s): Lee, J.Y., Ahn, H.J., Ha, K.S., Suh, S.W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free:
0.211 (Depositor), 0.208 (DCC)
R-Value Work:
0.205 (Depositor), 0.205 (DCC)
R-Value Observed:
0.205 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 1VC1

This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of the TM1442 protein from Thermotoga maritima, a homolog of the Bacillus subtilis general stress response anti-anti-sigma factor RsbV

Lee, J.Y., Ahn, H.J., Ha, K.S., Suh, S.W.

(2004) Proteins 56: 176-179

PubMed: 15162498 Search on PubMed
DOI: https://doi.org/10.1002/prot.20166
Primary Citation Related Structures:
1VC1

Organizational Affiliation

Department of Chemistry, College of Natural Sciences, Seoul National University, Seoul, Korea.

Macromolecule Content

Total Structure Weight: 24.63 kDa
Atom Count: 1,903
Modeled Residue Count: 220
Deposited Residue Count: 220
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative anti-sigma factor antagonist TM1442	A, B	110	Thermotoga maritima	Mutation(s): 0 Gene Names: TM1442
UniProt
Find proteins for Q9X1F5 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9X1F5 Go to UniProtKB: Q9X1F5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9X1F5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.211 (Depositor), 0.208 (DCC)
R-Value Work: 0.205 (Depositor), 0.205 (DCC)
R-Value Observed: 0.205 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 31.544	α = 90
b = 116.831	β = 119.84
c = 31.392	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling
CNS	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2004-09-28

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2004-09-28
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2023-12-27
Changes: Data collection, Database references

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