Interactions of D Amino Acids with Streptomyces griseus Aminopeptidase
Reiland, V., Gilboa, R., Spungin-Bialik, A., Schomburg, D., Shoham, Y., Blumberg, S., Shoham, G.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Aminopeptidase | 284 | Streptomyces griseus | Mutation(s): 0  EC: 3.4.11 | ![]() | |
UniProt | |||||
Find proteins for P80561 (Streptomyces griseus subsp. griseus (strain JCM 4626 / CBS 651.72 / NBRC 13350 / KCC S-0626 / ISP 5235)) Explore P80561  Go to UniProtKB:  P80561 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P80561 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DPN Query on DPN | E [auth A], F [auth A] | D-PHENYLALANINE C9 H11 N O2 COLNVLDHVKWLRT-MRVPVSSYSA-N | |||
ZN Query on ZN | B [auth A], C [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CA Query on CA | D [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 60.465 | α = 90 |
b = 60.465 | β = 90 |
c = 143.637 | γ = 90 |
Software Name | Purpose |
---|---|
SHELX | model building |
SHELXL-97 | refinement |
DENZO | data reduction |
SCALEPACK | data scaling |
CNS | phasing |