1RHW | pdb_00001rhw

The solution structure of the pH-induced monomer of dynein light chain LC8 from Drosophila

• PDB DOI: https://doi.org/10.2210/pdb1RHW/pdb
• BMRB: 6096

• Classification: CONTRACTILE PROTEIN
• Organism(s): Drosophila melanogaster
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2003-11-14 Released: 2004-04-27 
• Deposition Author(s): Makokha, M., Huang, Y.J., Montelione, G., Edison, A.S., Barbar, E.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 56 
• Conformers Submitted: 10 
• Selection Criteria: target function 

Literature

The solution structure of the pH-induced monomer of dynein light-chain LC8 from Drosophila.

Makokha, M., Huang, Y.J., Montelione, G., Edison, A.S., Barbar, E.

(2004) Protein Sci 13: 727-734

• PubMed: 14767079 
• DOI: https://doi.org/10.1110/ps.03462204
• Primary Citation Related Structures: 
  1RHW


• PubMed Abstract: 
  

  The structure of Drosophila LC8 pH-induced monomer has been determined by NMR spectroscopy using the program AutoStructure. The structure at pH 3 and 30 degrees C is similar to the individual subunits of mammalian LC8 dimer with the exception that a beta strand, which crosses between monomers to form an intersubunit beta-sheet in the dimer, is a flexible loop with turnlike conformations in the monomer. Increased flexibility in the interface region relative to the rest of the protein is confirmed by dynamic measurements based on (15)N relaxation. Comparison of the monomer and dimer structures indicates that LC8 is not a domain swapped dimer.

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Organizational Affiliation: 
• Department of Biochemistry and Biophysics, Ohio University, Athens, 45701-2979, USA.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 10.39 kDa 
• Atom Count: 729 
• Modeled Residue Count: 89 
• Deposited Residue Count: 89 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Dynein light chain 1, cytoplasmic	A	89	Drosophila melanogaster	Mutation(s): 0  Gene Names: CTP, CDLC1, DDLC1, CG6998
UniProt
Find proteins for Q24117 (Drosophila melanogaster) Explore Q24117  Go to UniProtKB:  Q24117

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 56 
• Conformers Submitted: 10 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2004-04-27 
Deposition Author(s): Makokha, M., Huang, Y.J., Montelione, G., Edison, A.S., Barbar, E.

Revision History  

• Version 1.0: 2004-04-27
  Type: Initial release
  
• Version 1.1: 2008-04-29
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-02
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-22
  Changes: Data collection