1PDT

PD235, PNA-DNA DUPLEX, NMR, 8 STRUCTURES

• PDB DOI: https://doi.org/10.2210/pdb1PDT/pdb
• NAKB: 1PDT

• Classification: PEPTIDE NUCLEIC ACID/DNA
• Mutation(s): No 


• Deposited: 1996-03-28 Released: 1996-10-14 
• Deposition Author(s): Eriksson, M., Nielsen, P.E.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Submitted: 8 

Literature

Solution structure of a peptide nucleic acid-DNA duplex.

Eriksson, M., Nielsen, P.E.

(1996) Nat Struct Biol 3: 410-413

• PubMed: 8612069 
• DOI: https://doi.org/10.1038/nsb0596-410
• Primary Citation of Related Structures:  
  1PDT

Biological Assembly 1  

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 4.56 kDa 
• Atom Count: 318 
• Modelled Residue Count: 17 
• Deposited Residue Count: 17 
• Unique nucleic acid chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Length	Organism	Image
DNA (5'-D(*GP*AP*CP*AP*TP*AP*GP*C)-3'	A	8	N/A

Entity ID: 2
Molecule	Chains	Length	Organism	Image
PEPTIDE NUCLEIC ACID (COOH-P(*G*C*T*A*T*G*T*C)-NH2)	B	9	N/A

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Submitted: 8 

Structure Validation

Entry History 

Deposition Data

• Released Date: 1996-10-14 
Deposition Author(s): Eriksson, M., Nielsen, P.E.

Revision History  

• Version 1.0: 1996-10-14
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Non-polymer description, Version format compliance
• Version 2.0: 2023-11-15
  Changes: Atomic model, Data collection, Database references, Derived calculations, Other