1OVQ | pdb_00001ovq

Solution structure of the hypothetical protein YqgF from Escherichia coli

PDB DOI: https://doi.org/10.2210/pdb1OVQ/pdb
BMRB: 5758

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Escherichia coli
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2003-03-27 Released: 2003-11-04
Deposition Author(s): Liu, D., Wang, Y.S., Wyss, D.F.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 25
Selection Criteria: back calculated data agree with experimental NOESY spectrum

wwPDB Validation 3D Report Full Report

Validation slider image for 1OVQ

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of the hypothetical protein YqgF from Escherichia coli reveals an RNAse H fold.

Liu, D., Wang, Y.S., Wyss, D.F.

(2003) J Biomol NMR 27: 389-392

PubMed: 14512736 Search on PubMed
DOI: https://doi.org/10.1023/a:1025840121177
Primary Citation Related Structures:
1OVQ

Macromolecule Content

Total Structure Weight: 15.21 kDa
Atom Count: 1,072
Modeled Residue Count: 138
Deposited Residue Count: 138
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical protein yqgF	A	138	Escherichia coli	Mutation(s): 0 Gene Names: YQGF OR B2949 OR C3535 EC: 3.1
UniProt
Find proteins for P0A8I1 (Escherichia coli (strain K12)) Explore P0A8I1 Go to UniProtKB: P0A8I1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0A8I1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 25
Selection Criteria: back calculated data agree with experimental NOESY spectrum

Structure Validation

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Entry History

Deposition Data

Released Date: 2003-11-04

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2003-11-04
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-02-23
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-22
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.