1OO3 | pdb_00001oo3

P395S mutant of the p85 regulatory subunit of the N-terminal src homology 2 domain of PI3-Kinase


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 

wwPDB Validation 3D Report Full Report

Validation slider image for 1OO3

This is version 1.4 of the entry. See complete history

Literature

Nuclear magnetic resonance structure of the P395S mutant of the N-SH2 domain of the p85 subunit of PI3 kinase: an SH2 domain with altered specificity

Guenther, U.L.Weyrauch, B.Zhang, X.Schaffhausen, B.

(2003) Biochemistry 42: 11120-11127

  • DOI: https://doi.org/10.1021/bi034353x
  • Primary Citation Related Structures: 
    1OO3, 1OO4

  • PubMed Abstract: 

    Understanding the specificity of Src homology 2 (SH2) domains is important because of their critical role in cell signaling. Previous genetic analysis has characterized mutants of the N-terminal src homology 2 (SH2) domain of the p85 subunit of phosphoinositide 3-kinase (PI3K). The P395S mutant exhibits a specificity for phosphopeptide binding different from that of the wild-type SH2. The P395S mutant has an increased affinity for the platelet-derived growth factor receptor (PDGFr) compared to polyomavirus middle T antigen (MT). Solution structures of the P395S mutant of the p85 N-SH2 alone and complexed to a PDGFr phosphopeptide were determined to explain the change in specificity. Chemical shift perturbations caused by different peptides were compared for mutant and wild-type structures. The results show that the single P395S mutation has broad effects on the structure. Furthermore, they provide a rationale for the observed changes in binding preference.


  • Organizational Affiliation
    • Institute for Biophysical Chemistry, Centre of Biomolecular Magnetic Resonance, J. W. Goethe University, Frankfurt, Marie-Curie-Strasse 9, 60439 Frankfurt, Germany.

Macromolecule Content 

  • Total Structure Weight: 12.86 kDa 
  • Atom Count: 905 
  • Modeled Residue Count: 111 
  • Deposited Residue Count: 111 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Phosphatidylinositol 3-kinase regulatory alpha subunit111Bos taurusMutation(s): 1 
UniProt
Find proteins for P23727 (Bos taurus)
Explore P23727 
Go to UniProtKB:  P23727
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP23727
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2003-03-25
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2021-11-10
    Changes: Data collection, Database references, Derived calculations
  • Version 1.4: 2024-05-29
    Changes: Data collection