1OGW

Synthetic Ubiquitin with fluoro-Leu at 50 and 67

• PDB DOI: https://doi.org/10.2210/pdb1OGW/pdb

• Classification: CELL CYCLE
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2003-05-13 Released: 2003-05-30 
• Deposition Author(s): Alexeev, D., Ramage, R., Young, D.W., Sawyer, L.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.32 Å
• R-Value Observed: 0.222 

Starting Model: experimental

Literature

Synthesis, Structural and Biological Studies of Ubiquitin Mutants Containing (2S, 4S)-5-Fluoroleucine Residues Strategically Placed in the Hydrophobic Core

Alexeev, D., Barlow, P.N., Bury, S.M., Charrier, J.-D., Cooper, A., Hadfield, D., Jamieson, C., Kelly, S.M., Layfield, R., Mayer, R.J., Mcsparran, H., Price, N.C., Ramage, R., Sawyer, L., Starkmann, B.A., Uhrin, D., Willken, J., Young, D.W.

(2003) Chembiochem 4: 894

• PubMed: 12964166 
• DOI: https://doi.org/10.1002/cbic.200300699
• Primary Citation of Related Structures:  
  1OGW

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Organizational Affiliation: 

Institute of Cell Molecular Biology (ICMB), University of Edinburgh, Michael Swann Building, Mayfield Road, Edinburgh EH9 3RJ, Scotland, UK.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PQS (software)

Macromolecule Content

• Total Structure Weight: 8.61 kDa 
• Atom Count: 733 
• Modelled Residue Count: 76 
• Deposited Residue Count: 76 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
UBIQUITIN	A	76	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P0CG48 (Homo sapiens) Explore P0CG48  Go to UniProtKB:  P0CG48
GTEx:  ENSG00000150991

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
LEF	A	L-PEPTIDE LINKING	C6 H12 F N O2		LEU

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.32 Å
• R-Value Observed: 0.222 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 50.84	α = 90
b = 42.77	β = 90
c = 28.95	γ = 90

Software Package:

Software Name	Purpose
SHELXL-97	refinement
DENZO	data reduction
SCALEPACK	data scaling
SHELXL-97	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2003-05-30 
Deposition Author(s): Alexeev, D., Ramage, R., Young, D.W., Sawyer, L.

Revision History  

• Version 1.0: 2003-05-30
  Type: Initial release
  
• Version 1.1: 2011-12-07
  Changes: Database references, Derived calculations, Other, Refinement description, Structure summary, Version format compliance
• Version 1.2: 2023-12-13
  Changes: Data collection, Database references, Derived calculations, Other, Refinement description