1NKL | pdb_00001nkl

NK-LYSIN FROM PIG, NMR, 20 STRUCTURES

PDB DOI: https://doi.org/10.2210/pdb1NKL/pdb

Classification: SAPOSIN FOLD
Organism(s): Sus scrofa
Mutation(s): No
Membrane Protein: Yes OPM

Deposited: 1997-04-17 Released: 1997-06-16
Deposition Author(s): Otting, G., Liepinsh, E.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: LEAST RESTRAINT VIOLATION

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

Saposin fold revealed by the NMR structure of NK-lysin.

Liepinsh, E., Andersson, M., Ruysschaert, J.M., Otting, G.

(1997) Nat Struct Biol 4: 793-795

PubMed: 9334742 Search on PubMed
DOI: https://doi.org/10.1038/nsb1097-793
Primary Citation Related Structures:
1NKL

PubMed Abstract:
NK-lysin is the first representative of a family of sequence related proteins--saposins, surfactant-associated protein B, pore forming amoeba proteins, and domains of acid sphingomyelinase, acyloxyacylhydrolase and plant aspartic proteinases--for which a structure has been determined.

Macromolecule Content

Total Structure Weight: 8.95 kDa
Atom Count: 620
Modeled Residue Count: 78
Deposited Residue Count: 78
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NK-LYSIN	A	78	Sus scrofa	Mutation(s): 0 Membrane Entity: Yes
UniProt
Find proteins for Q29075 (Sus scrofa) Explore Q29075 Go to UniProtKB: Q29075
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q29075
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: LEAST RESTRAINT VIOLATION

Structure Validation

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Entry History

Deposition Data

Released Date: 1997-06-16

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 1997-06-16
Type: Initial release
Version 1.1: 2008-03-24
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-02-23
Changes: Database references, Derived calculations, Other
Version 1.4: 2024-11-20
Changes: Data collection, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.