1MVU | pdb_00001mvu

SINGLE CHAIN FV OF C219 HEAVY CHAIN V101L MUTANT IN COMPLEX WITH SYNTHETIC EPITOPE PEPTIDE

• PDB DOI: https://doi.org/10.2210/pdb1MVU/pdb

• Classification: IMMUNE SYSTEM
• Organism(s): Mus musculus, Cricetulus griseus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2002-09-26 Released: 2003-10-07 
• Deposition Author(s): Chan, D.C.M., Kuntz, D.A., Rose, D.R.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.78 Å
• R-Value Free: 
  0.223 (Depositor), 0.222 (DCC) 
• R-Value Work: 
  0.197 (Depositor), 0.197 (DCC) 
• R-Value Observed: 
  0.197 (Depositor) 

Literature

Single Chain C219 V(101H)L Mutant Antibody Complexed with a Helical Peptide

Chan, D.C.M., Hirama, T., Mackenzie, C.R., Kuntz, D.A., Rose, D.R.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 3-mer - A1B1C1 Pseudo Symmetry: Asymmetric - C1 
Pseudo Stoichiometry: Hetero 3-mer - A2B1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 27.54 kDa 
• Atom Count: 2,104 
• Modeled Residue Count: 246 
• Deposited Residue Count: 248 
• Unique protein chains: 3

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Ig kappa-chain VJ-region (Light chain)	A	114	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q6KB05 (Mus musculus) Explore Q6KB05  Go to UniProtKB:  Q6KB05

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Ig VDJ-region (HEAVY CHAIN)	B	121	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q505N9 (Mus musculus) Explore Q505N9  Go to UniProtKB:  Q505N9

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
P-GLYCOPROTEIN	C [auth P]	13	N/A	Mutation(s): 0  EC: 7.6.2.1 (UniProt), 7.6.2.2 (UniProt)
UniProt
Find proteins for P21448 (Cricetulus griseus) Explore P21448  Go to UniProtKB:  P21448

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SO4	D [auth A]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.78 Å
• R-Value Free:  0.223 (Depositor), 0.222 (DCC) 
• R-Value Work:  0.197 (Depositor), 0.197 (DCC) 
• R-Value Observed: 0.197 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 41.733	α = 90
b = 50.967	β = 93.89
c = 58.636	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
CNS	refinement
CNS	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2003-10-07 
Deposition Author(s): Chan, D.C.M., Kuntz, D.A., Rose, D.R.

Revision History  

• Version 1.0: 2003-10-07
  Type: Initial release
  
• Version 1.1: 2008-04-28
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2013-09-18
  Changes: Derived calculations
• Version 1.4: 2024-11-13
  Changes: Data collection, Database references, Derived calculations, Structure summary