1LKI | pdb_00001lki

THE CRYSTAL STRUCTURE AND BIOLOGICAL FUNCTION OF LEUKEMIA INHIBITORY FACTOR: IMPLICATIONS FOR RECEPTOR BINDING

• PDB DOI: https://doi.org/10.2210/pdb1LKI/pdb

• Classification: CYTOKINE
• Organism(s): Mus musculus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 1994-12-12 Released: 1995-03-31 
• Deposition Author(s): Robinson, R.C., Grey, L.M., Staunton, D., Stuart, D.I., Heath, J.K., Jones, E.Y.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.00 Å
• R-Value Work: 
  0.186 (Depositor) 
• R-Value Observed: 
  0.186 (Depositor) 

Literature

The crystal structure and biological function of leukemia inhibitory factor: implications for receptor binding.

Robinson, R.C., Grey, L.M., Staunton, D., Vankelecom, H., Vernallis, A.B., Moreau, J.F., Stuart, D.I., Heath, J.K., Jones, E.Y.

(1994) Cell 77: 1101-1116

• PubMed: 8020098 
• DOI: https://doi.org/10.1016/0092-8674(94)90449-9
• Primary Citation Related Structures: 
  1LKI


• PubMed Abstract: 
  

  The structure of murine leukemia inhibitory factor (LIF) has been determined by X-ray crystallography at 2.0 A resolution. The main chain fold conforms to the four alpha-helix bundle topology previously observed for several members of the hematopoietic cytokine family. Of these, LIF shows closest structural homology to granulocyte colony-stimulating factor and growth hormone (GH). Sequence alignments for the functionally related molecules oncostatin M and ciliary neurotrophic factor, when mapped to the LIF structure, indicate regions of conserved surface character. Analysis of the biological function and receptor specificity of a series of human-mouse LIF chimeras implicate two regions of receptor interaction that are located in the fourth helix and the preceding loop. A model for receptor binding based on the structure of the GH ligand-receptor complex requires additional, novel features to account for these data.

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Organizational Affiliation: 
• Department of Biochemistry, University of Oxford, England.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 19.89 kDa 
• Atom Count: 1,386 
• Modeled Residue Count: 172 
• Deposited Residue Count: 180 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
LEUKEMIA INHIBITORY FACTOR	A	180	Mus musculus	Mutation(s): 0
UniProt
Find proteins for P09056 (Mus musculus) Explore P09056  Go to UniProtKB:  P09056

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.00 Å
• R-Value Work:  0.186 (Depositor) 
• R-Value Observed: 0.186 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 31.1	α = 90
b = 56.2	β = 90
c = 95.3	γ = 90

Software Package:

Software Name	Purpose
X-PLOR	model building
X-PLOR	refinement
X-PLOR	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 1995-03-31 
Deposition Author(s): Robinson, R.C., Grey, L.M., Staunton, D., Stuart, D.I., Heath, J.K., Jones, E.Y.

Revision History  

• Version 1.0: 1995-03-31
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2024-06-05
  Changes: Data collection, Database references, Other
• Version 1.4: 2024-11-20
  Changes: Structure summary