Download MendeleyRefinement of Four Endothiapepsin Inhibitor Complexes. Crystallographic Studies of Cytochrome Ch from Methylobacterium Extorquens and Inhibitor Complexes of Aspartic Proteinases.
Read, J.A.(1999) Thesis
1E5O
Endothiapepsin complex with inhibitor DB2
- PDB DOI: https://doi.org/10.2210/pdb1E5O/pdb
- Classification: HYDROLASE/HYDROLASE INHIBITOR
- Organism(s): Cryphonectria parasitica
- Mutation(s): No
- Deposited: 2000-07-28 Released: 2000-09-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.237
- R-Value Work: 0.181
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ENDOTHIAPEPSIN | A [auth E] | 330 | Cryphonectria parasitica | Mutation(s): 0 EC: 3.4.23.23 (PDB Primary Data), 3.4.23.22 (UniProt) |  |
UniProt | |||||
Find proteins for P11838 (Cryphonectria parasitica) Explore P11838 Go to UniProtKB: P11838 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P11838 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| 3AI Query on 3AI | B [auth E] | N-[(2S)-2-amino-3-phenylpropyl]-D-methionyl-L-alanyl-L-isoleucine C23 H38 N4 O4 S WTDYTUSSFIIXMV-HNULKUCHSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.237
- R-Value Work: 0.181
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.6 | α = 90 |
| b = 74.05 | β = 110 |
| c = 45.7 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MOSFLM | data reduction |
| ROTAVATA | data scaling |
Entry History
Deposition Data
- Released Date: 2000-09-07 Deposition Author(s): Read, J.A., Cooper, J.B., Toldo, L., Bailey, D.
Revision History (Full details and data files)
- Version 1.0: 2000-09-07
Type: Initial release - Version 1.1: 2011-07-13
Changes: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary, Version format compliance - Version 1.2: 2023-11-29
Changes: Data collection, Database references, Derived calculations - Version 1.3: 2023-12-13
Changes: Refinement description - Version 1.4: 2024-11-13
Changes: Structure summary
