1CFY | pdb_00001cfy

YEAST COFILIN, MONOCLINIC CRYSTAL FORM

• PDB DOI: https://doi.org/10.2210/pdb1CFY/pdb

• Classification: ACTIN-BINDING PROTEIN
• Organism(s): Saccharomyces cerevisiae
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 1996-11-26 Released: 1997-04-01 
• Deposition Author(s): Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Work: 
  0.175 (Depositor) 

Starting Model: experimental

Literature

Structure determination of yeast cofilin.

Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

(1997) Nat Struct Biol 4: 366-369

• PubMed: 9145106 
• DOI: https://doi.org/10.1038/nsb0597-366
• Primary Citation Related Structures: 
  1CFY, 1COF, 1QPV


• PubMed Abstract: 
  

  Cofilin, a ubiquitous 15,000 M(r) protein, plays a central role in regulating cytoskeletal dynamics. Cofilin binds to actin monomers and filaments, and has a pH-dependent actin severing activity. The structure will allow for a detailed analysis of cofilin function.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 31.84 kDa 
• Atom Count: 2,168 
• Modeled Residue Count: 266 
• Deposited Residue Count: 286 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
COFILIN	A, B	143	Saccharomyces cerevisiae	Mutation(s): 0
UniProt
Find proteins for Q03048 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore Q03048  Go to UniProtKB:  Q03048

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Work:  0.175 (Depositor) 

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 152.089	α = 90
b = 30.767	β = 133.15
c = 105.94	γ = 90

Software Package:

Software Name	Purpose
X-PLOR	model building
PROFFT	refinement
X-PLOR	refinement
XDS	data reduction
XSCALE	data scaling
X-PLOR	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 1997-04-01 
Deposition Author(s): Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

Revision History  

• Version 1.0: 1997-04-01
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2023-08-09
  Changes: Database references, Other, Refinement description
• Version 1.4: 2024-05-22
  Changes: Data collection