1BGF | pdb_00001bgf

STAT-4 N-DOMAIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 
    0.216 (Depositor), 0.205 (DCC) 
  • R-Value Work: 
    0.188 (Depositor), 0.178 (DCC) 
  • R-Value Observed: 
    0.188 (Depositor) 

wwPDB Validation 3D Report Full Report

Validation slider image for 1BGF

This is version 1.4 of the entry. See complete history

Literature

Structure of the amino-terminal protein interaction domain of STAT-4.

Vinkemeier, U.Moarefi, I.Darnell Jr., J.E.Kuriyan, J.

(1998) Science 279: 1048-1052

  • DOI: https://doi.org/10.1126/science.279.5353.1048
  • Primary Citation Related Structures: 
    1BGF

  • PubMed Abstract: 

    STATs (signal transducers and activators of transcription) are a family of transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors. The crystal structure of an NH2-terminal conserved domain (N-domain) comprising the first 123 residues of STAT-4 was determined at 1.45 angstroms. The domain consists of eight helices that are assembled into a hook-like structure. The N-domain has been implicated in several protein-protein interactions affecting transcription, and it enables dimerized STAT molecules to polymerize and to bind DNA cooperatively. The structure shows that N-domains can interact through an extensive interface formed by polar interactions across one face of the hook. Mutagenesis of an invariant tryptophan residue at the heart of this interface abolished cooperative DNA binding by the full-length protein in vitro and reduced the transcriptional response after cytokine stimulation in vivo.


  • Organizational Affiliation
    • Laboratory of Molecular Cell Biology and Laboratories of Molecular Biophysics, The Rockefeller University, New York, NY 10021, USA.

Macromolecule Content 

  • Total Structure Weight: 14.5 kDa 
  • Atom Count: 1,179 
  • Modeled Residue Count: 124 
  • Deposited Residue Count: 124 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
STAT-4124Mus musculusMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P42228 (Mus musculus)
Explore P42228 
Go to UniProtKB:  P42228
IMPC:  MGI:103062
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP42228
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free:  0.216 (Depositor), 0.205 (DCC) 
  • R-Value Work:  0.188 (Depositor), 0.178 (DCC) 
  • R-Value Observed: 0.188 (Depositor) 
Space Group: P 65 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 79.5α = 90
b = 79.5β = 90
c = 84.7γ = 120
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
X-PLORphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1998-09-16
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2011-11-16
    Changes: Atomic model
  • Version 1.4: 2024-02-07
    Changes: Data collection, Database references, Other