1B7T | pdb_00001b7t

MYOSIN DIGESTED BY PAPAIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 
    0.297 (Depositor) 
  • R-Value Work: 
    0.224 (Depositor) 

Starting Models: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 1B7T

This is version 1.4 of the entry. See complete history

Literature

Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head.

Houdusse, A.Kalabokis, V.N.Himmel, D.Szent-Gyorgyi, A.G.Cohen, C.

(1999) Cell 97: 459-470

  • DOI: https://doi.org/10.1016/s0092-8674(00)80756-4
  • Primary Citation Related Structures: 
    1B7T

  • PubMed Abstract: 

    The crystal structure of a proteolytic subfragment from scallop striated muscle myosin, complexed with MgADP, has been solved at 2.5 A resolution and reveals an unusual conformation of the myosin head. The converter and the lever arm are in very different positions from those in either the pre-power stroke or near-rigor state structures; moreover, in contrast to these structures, the SH1 helix is seen to be unwound. Here we compare the overall organization of the myosin head in these three states and show how the conformation of three flexible "joints" produces rearrangements of the four major subdomains in the myosin head with different bound nucleotides. We believe that this novel structure represents one of the prehydrolysis ("ATP") states of the contractile cycle in which the myosin heads stay detached from actin.


  • Organizational Affiliation
    • Rosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, Massachusetts 02254-9110, USA.

Macromolecule Content 

  • Total Structure Weight: 131.03 kDa 
  • Atom Count: 8,383 
  • Modeled Residue Count: 1,057 
  • Deposited Residue Count: 1,147 
  • Unique protein chains: 3

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
MYOSIN HEAVY CHAIN835Argopecten irradiansMutation(s): 0 
UniProt
Find proteins for P24733 (Argopecten irradians)
Explore P24733 
Go to UniProtKB:  P24733
Entity Groups
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UniProt GroupP24733
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Reference Sequence
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
MYOSIN REGULATORY LIGHT CHAINB [auth Y]156Argopecten irradiansMutation(s): 0 
UniProt
Find proteins for P13543 (Argopecten irradians)
Explore P13543 
Go to UniProtKB:  P13543
Entity Groups
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UniProt GroupP13543
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
MYOSIN ESSENTIAL LIGHT CHAINC [auth Z]156Argopecten irradiansMutation(s): 0 
UniProt
Find proteins for P07291 (Argopecten irradians)
Explore P07291 
Go to UniProtKB:  P07291
Entity Groups
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UniProt GroupP07291
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free:  0.297 (Depositor) 
  • R-Value Work:  0.224 (Depositor) 
Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 51.7α = 89.1
b = 58.9β = 90
c = 138.9γ = 73.5
Software Package:
Software NamePurpose
DENZOdata reduction
SCALAdata scaling
AMoREphasing
X-PLORrefinement
CCP4data scaling

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1999-05-12
    Type: Initial release
  • Version 1.1: 2008-04-26
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2023-05-31
    Changes: Database references, Derived calculations
  • Version 1.4: 2023-09-20
    Changes: Data collection, Refinement description