1AG2 | pdb_00001ag2

PRION PROTEIN DOMAIN PRP(121-231) FROM MOUSE, NMR, 2 MINIMIZED AVERAGE STRUCTURE


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 
  • Selection Criteria: BEST 20 

wwPDB Validation 3D Report Full Report

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This is version 1.5 of the entry. See complete history

Literature

NMR structure of the mouse prion protein domain PrP(121-231).

Riek, R.Hornemann, S.Wider, G.Billeter, M.Glockshuber, R.Wuthrich, K.

(1996) Nature 382: 180-182

  • DOI: https://doi.org/10.1038/382180a0
  • Primary Citation Related Structures: 
    1AG2

  • PubMed Abstract: 

    The 'protein only' hypothesis states that a modified form of normal prion protein triggers infectious neurodegenerative diseases, such as bovine spongiform encephalopathy (BSE), or Creutzfeldt-Jakob disease (CJD) in humans. Prion proteins are thought to exist in two different conformations: the 'benign' PrPcform, and the infectious 'scrapie form', PrPsc. Knowledge of the three-dimensional structure of PrPc is essential for understanding the transition to PrPsc. The nuclear magnetic resonance (NMR) structure of the autonomously folding PrP domain comprising residues 121-231 (ref. 6) contains a two-stranded antiparallel beta-sheet and three alpha-helices. This domain contains most of the point-mutation sites that have been linked, in human PrP, to the occurrence of familial prion diseases. The NMR structure shows that these mutations occur within, or directly adjacent to, regular secondary structures. The presence of a beta-sheet in PrP(121-231) is in contrast with model predictions of an all-helical structure of PrPc (ref. 8), and may be important for the initiation of the transition from PrPc to PrPsc.


  • Organizational Affiliation
    • Institut für Molekularbiologie und Biophysik, Eidgenossische Technische Hochschule-Honggerberg, Zürich, Switzerland.

Macromolecule Content 

  • Total Structure Weight: 12.35 kDa 
  • Atom Count: 864 
  • Modeled Residue Count: 103 
  • Deposited Residue Count: 103 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
MAJOR PRION PROTEIN103Mus musculusMutation(s): 0 
Gene Names: T7
UniProt
Find proteins for P04925 (Mus musculus)
Explore P04925 
Go to UniProtKB:  P04925
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP04925
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 
  • Selection Criteria: BEST 20 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1997-10-08
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2016-02-24
    Changes: Database references
  • Version 1.4: 2024-06-05
    Changes: Data collection, Database references, Other
  • Version 1.5: 2024-11-06
    Changes: Structure summary