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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "ATP-BINDING PROTEIN"

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

Pseudomonas sp. ADP (18)

Taxonomy

Bacteria (18)

Experimental Method

X-RAY DIFFRACTION (18)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	1.5 - 2.0 (6)
	2.0 - 2.5 (6)
	2.5 - 3.0 (5)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (5)
	2015 - 2019 (12)

Enzyme Classification Name

Hydrolases (14)

Symmetry Type

	Cyclic (9)
	Asymmetric (4)
	Dihedral (7)

SCOP Classification

	Alpha and beta proteins (a+b) (4)
	Artifacts (4)

AllSelected

1 to 18 of 18 Structures

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2QT3 \| pdb_00002qt3	Download File View File

Crystal structure of N-Isopropylammelide isopropylaminohydrolase AtzC from Pseudomonas sp. strain ADP complexed with Zn

Fedorov, A.A., Fedorov, E.V., Seffernick, J., Wackett, L.P., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-09-11
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	N-isopropylammelide isopropyl amidohydrolase (protein)
Unique Ligands	ZN

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4BVQ \| pdb_00004bvq	Download File View File

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation.

Peat, T.S., Balotra, S., Wilding, M., French, N.G., Briggs, L.J., Panjikar, S., Cowieson, N., Newman, J., Scott, C.

(2013) Mol Microbiol 88: 1149

Released	2013-07-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	CYANURIC ACID AMIDOHYDROLASE (protein)
Unique Ligands	MG, PEG, PO4

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4BVR \| pdb_00004bvr	Download File View File

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation.

Peat, T.S., Balotra, S., Wilding, M., French, N.G., Briggs, L.J., Panjikar, S., Cowieson, N., Newman, J., Scott, C.

(2013) Mol Microbiol 88: 1149

Released	2013-07-17
Method	X-RAY DIFFRACTION 2.58 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	CYANURIC ACID AMIDOHYDROLASE (protein)
Unique Ligands	MG, PEG, WDL

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4BVS \| pdb_00004bvs	Download File View File

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation.

Peat, T.S., Balotra, S., Wilding, M., French, N.G., Briggs, L.J., Panjikar, S., Cowieson, N., Newman, J., Scott, C.

(2013) Mol Microbiol 88: 1149

Released	2013-07-17
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	CYANURIC ACID AMIDOHYDROLASE (protein)
Unique Ligands	AX2, MG

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4BVT \| pdb_00004bvt	Download File View File

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation

Peat, T.S., Balotra, S., Wilding, M., French, N.G., Briggs, L.J., Panjikar, S., Cowieson, N., Newman, J., Scott, C.

(2013) Mol Microbiol 88: 1149

Released	2013-07-17
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	CYANURIC ACID AMIDOHYDROLASE (protein)
Unique Ligands	BR8, MG, PEG

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4CP8 \| pdb_00004cp8	Download File View File

Structure of the amidase domain of allophanate hydrolase from Pseudomonas sp strain ADP

Balotra, S., Newman, J., French, N., French, L., Peat, T.S., Scott, C.

(2015) Appl Environ Microbiol 81: 470

Released	2014-11-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	ALLOPHANATE HYDROLASE (protein)
Unique Ligands	MLI

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4CQB \| pdb_00004cqb	Download File View File

The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies

Balotra, S., Newman, J., French, N.G., Peat, T.S., Scott, C.

(2015) PLoS One 1: 37700

Released	2015-03-04
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	N-ISOPROPYLAMMELIDE ISOPROPYL AMIDOHYDROLASE (protein)
Unique Ligands	CL, DMS, MLI, ZN

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4CQC \| pdb_00004cqc	Download File View File

The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies

Balotra, S., Newman, J., French, N.G., Peat, T.S., Scott, C.

(2015) PLoS One 1: 37700

Released	2015-03-04
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	N-ISOPROPYLAMMELIDE ISOPROPYL AMIDOHYDROLASE (protein)
Unique Ligands	CL, EPE, ZN

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4CQD \| pdb_00004cqd	Download File View File

The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies

Balotra, S., Newman, J., French, N.G., Peat, T.S., Scott, C.

(2015) PLoS One 1: 37700

Released	2015-03-04
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	N-ISOPROPYLAMMELIDE ISOPROPYL AMIDOHYDROLASE (protein)
Unique Ligands	CL, MES, MLI, ZN

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4V1X \| pdb_00004v1x	Download File View File

The structure of the hexameric atrazine chlorohydrolase, AtzA

Peat, T.S., Newman, J., Balotra, S., Lucent, D., Warden, A.C., Scott, C.

(2015) Acta Crystallogr D Biol Crystallogr 71: 710

Released	2015-03-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	ATRAZINE CHLOROHYDROLASE (protein)
Unique Ligands	FE, PEG

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4V1Y \| pdb_00004v1y	Download File View File

The structure of the hexameric atrazine chlorohydrolase, AtzA

Peat, T.S., Newman, J., Balotra, S., Lucent, D., Warden, A.C., Scott, C.

(2015) Acta Crystallogr D Biol Crystallogr 71: 710

Released	2015-03-11
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	ATRAZINE CHLOROHYDROLASE (protein)
Unique Ligands	CL, EDO, FE, PEG

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5AKQ \| pdb_00005akq	Download File View File

X-ray structure and mutagenesis studies of the N-isopropylammelide isopropylaminohydrolase, AtzC

Balotra, S., Warden, A.C., Newman, J., Briggs, L.J., Scott, C., Peat, T.S.

(2015) PLoS One 1: 37700

Released	2015-03-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	N-ISOPROPYLAMMELIDE ISOPROPYL AMIDOHYDROLASE (protein)
Unique Ligands	CL, ZN

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6C62 \| pdb_00006c62	Download File View File

An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme.

Peat, T.S., Esquirol, L., Wilding, M., Liu, J.W., French, N.G., Hartley, C.J., Hideki, O., Easton, C.J., Newman, J., Scott, C.

(2018) J Biological Chem 293: 7880-7891

Released	2018-03-21
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	AtzG (protein) Biuret hydrolase (protein)
Unique Ligands	MG

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6C6G \| pdb_00006c6g	Download File View File

An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. Inhibitor bound complex.

Peat, T.S., Esquirol, L., Wilding, M., Liu, J.W., French, N.G., Hartley, C.J., Hideki, O., Easton, C.J., Newman, J., Scott, C.

(2018) J Biological Chem 293: 7880-7891

Released	2018-03-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	AtzG (protein) Biuret hydrolase (protein)
Unique Ligands	CA

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6D63 \| pdb_00006d63	Download File View File

The structure of AtzH: a little known member of the atrazine breakdown pathway

Peat, T.S., Newman, J., Scott, C., Esquirol, L.

(2018) PLoS One 13: e0206949-e0206949

Released	2018-11-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	atzH (protein)
Unique Ligands	6JN

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6PI5 \| pdb_00006pi5	Download File View File

The evolving story of AtzT, a periplasmic binding protein

Peat, T.S., Newman, J., Scott, C., Esquirol, L., Dennis, M., Nebl, T.

(2019) Acta Crystallogr D Struct Biol 75: 995-1002

Released	2019-11-13
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	Atrazine periplasmic binding protein (protein)
Unique Ligands	DMS, GUN

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6PI6 \| pdb_00006pi6	Download File View File

The evolving story of AtzT, a periplasmic binding protein

Peat, T.S., Newman, J., Scott, C., Esquirol, L., Dennis, M., Nebl, T.

(2019) Acta Crystallogr D Struct Biol 75: 995-1002

Released	2019-11-13
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	Atrazine periplasmic binding protein (protein)
Unique Ligands	DMS, OKM

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6PII \| pdb_00006pii	Download File View File

The evolving story of AtzT, a periplasmic binding protein

Peat, T.S., Newman, J., Scott, C., Esquirol, L., Dennis, M., Nebl, T.

(2019) Acta Crystallogr D Struct Biol 75: 995-1002

Released	2019-11-13
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Pseudomonas sp. ADP
Macromolecule	Atrazine periplasmic binding protein (protein)
Unique Ligands	CA, EMC, GUN, PO4

1 to 18 of 18 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2QT3 | pdb_00002qt3

Crystal structure of N-Isopropylammelide isopropylaminohydrolase AtzC from Pseudomonas sp. strain ADP complexed with Zn

4BVQ | pdb_00004bvq

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation.

4BVR | pdb_00004bvr

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation.

4BVS | pdb_00004bvs

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation.

4BVT | pdb_00004bvt

Cyanuric acid hydrolase: evolutionary innovation by structural concatenation

4CP8 | pdb_00004cp8

Structure of the amidase domain of allophanate hydrolase from Pseudomonas sp strain ADP

4CQB | pdb_00004cqb

The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies

4CQC | pdb_00004cqc

The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies

4CQD | pdb_00004cqd

The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies

4V1X | pdb_00004v1x

The structure of the hexameric atrazine chlorohydrolase, AtzA

4V1Y | pdb_00004v1y

The structure of the hexameric atrazine chlorohydrolase, AtzA

5AKQ | pdb_00005akq

X-ray structure and mutagenesis studies of the N-isopropylammelide isopropylaminohydrolase, AtzC

6C62 | pdb_00006c62

An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme.

6C6G | pdb_00006c6g

An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. Inhibitor bound complex.

6D63 | pdb_00006d63

The structure of AtzH: a little known member of the atrazine breakdown pathway

6PI5 | pdb_00006pi5

The evolving story of AtzT, a periplasmic binding protein

6PI6 | pdb_00006pi6

The evolving story of AtzT, a periplasmic binding protein

6PII | pdb_00006pii

The evolving story of AtzT, a periplasmic binding protein

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2QT3 | pdb_00002qt3

4BVQ | pdb_00004bvq

4BVR | pdb_00004bvr

4BVS | pdb_00004bvs

4BVT | pdb_00004bvt

4CP8 | pdb_00004cp8

4CQB | pdb_00004cqb

4CQC | pdb_00004cqc

4CQD | pdb_00004cqd

4V1X | pdb_00004v1x

4V1Y | pdb_00004v1y

5AKQ | pdb_00005akq

6C62 | pdb_00006c62

6C6G | pdb_00006c6g

6D63 | pdb_00006d63

6PI5 | pdb_00006pi5

6PI6 | pdb_00006pi6

6PII | pdb_00006pii