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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Enzyme Classification Number = 3.1.3.57

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Bos taurus (7)
	Entamoeba histolytica (2)
	Arabidopsis thaliana (1)
	Entamoeba histolytica HM-1:IMSS (1)
	Homo sapiens (1)
	Rattus norvegicus (1)

Taxonomy

Eukaryota (13)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

Protein (13)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (3)
	2.5 - 3.0 (6)
	3.0 - 3.5 (2)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (1)
	2005 - 2009 (1)
	2010 - 2014 (3)
	2020 - 2024 (7)

Enzyme Classification Name

Hydrolases (13)

Symmetry Type

Asymmetric (13)

SCOP Classification

	Multi-domain proteins (alpha and beta) (8)
	Artifacts (1)

AllSelected

1 to 13 of 13 Structures

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1INP \| pdb_00001inp	Download File View File

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE AT 2.3 ANGSTROMS RESOLUTION

York, J.D., Ponder, J.W., Chen, Z., Mathews, F.S., Majerus, P.W.

(1994) Biochemistry 33: 13164-13171

Released	1995-01-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bos taurus
Macromolecule	INOSITOL POLYPHOSPHATE 1-PHOSPHATASE (protein)
Unique Ligands	MG

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1JP4 \| pdb_00001jp4	Download File View File

Crystal Structure of an Enzyme Displaying both Inositol-Polyphosphate 1-Phosphatase and 3'-Phosphoadenosine-5'-Phosphate Phosphatase Activities

Patel, S., Yenush, L., Rodriguez, P.L., Serrano, R., Blundell, T.L.

(2002) J Mol Biology 315: 677-685

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Rattus norvegicus
Macromolecule	3'(2'),5'-bisphosphate nucleotidase (protein)
Unique Ligands	AMP, BME, MG, PO4

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2WEF \| pdb_00002wef	Download File View File

Human 3'(2'), 5'-bisphosphate nucleotidase 1 (BPNT1) in complex with AMP, PO4 and Magnesium

Moche, M., Schutz, P., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Karlberg, T., Kotenyova, T., Nilsson, M.E., Nyman, T., Persson, C., Sagemark, J., Schueler, H., Siponen, M.I., Thorsell, A.G., Tresaugues, L., Van Der Berg, S., Weigelt, J., Welin, M., Wisniewska, M., Nordlund, P., Structural Genomics Consortium (SGC)

To be published

Released	2009-04-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	3'(2')\, 5'-BISPHOSPHATE NUCLEOTIDASE 1 (protein)
Unique Ligands	AMP, MG, PO4

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4HXV \| pdb_00004hxv	Download File View File

Crystal structure of 3'(2'),5'-bisphosphate nucleotidase1 from Entamoeba histolytica in complex with AMP and metal ions

Tarique, K.F., Abdul Rehman, S.A., Gourinath, S.

(2014) Acta Crystallogr D Biol Crystallogr 70: 2019-2031

Released	2013-11-13
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Entamoeba histolytica
Macromolecule	3'(2'),5'-bisphosphate nucleotidase, putative (protein)
Unique Ligands	AMP, MG, NA

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4O7I \| pdb_00004o7i	Download File View File

Structural and functional characterization of 3'(2'),5'-bisphosphate nucleotidase1 from Entamoeba histolytica

Tarique, K.F., Rehman, S.A.A., Gourinath, S.

(2014) Acta Crystallogr D Biol Crystallogr 70: 2019-2031

Released	2014-01-22
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Entamoeba histolytica
Macromolecule	3'(2'),5'-bisphosphate nucleotidase, putative (protein)
Unique Ligands	MG, PO4

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4QXD \| pdb_00004qxd	Download File View File

Crystal structure of Inositol Polyphosphate 1-Phosphatase from Entamoeba histolytica

Tarique, K.F., Abdul Rehman, S.A., Betzel, C., Gourinath, S.

(2014) Acta Crystallogr D Biol Crystallogr 70: 3023-3033

Released	2014-08-06
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Entamoeba histolytica HM-1:IMSS
Macromolecule	3'(2'),5'-bisphosphate nucleotidase, putative (protein)
Unique Ligands	MG, PO4

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6WRO \| pdb_00006wro	Download File View File

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM BUT NO LITHIUM AT 3 ANGSTROM RESOLUTION

Dollins, D.E., Endo-Streeter, S., York, J.D.

(2020) J Biological Chem 296: 100059-100059

Released	2020-11-18
Method	X-RAY DIFFRACTION 3 Å
Organisms	Bos taurus
Macromolecule	Inositol polyphosphate 1-phosphatase (protein)
Unique Ligands	GD, SO4

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6WRR \| pdb_00006wrr	Download File View File

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM AND LITHIUM AT 2.5 ANGSTROM RESOLUTION

Dollins, D.R., Endo-Streeter, S., York, J.D.

(2020) J Biological Chem 296: 100059-100059

Released	2020-11-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bos taurus
Macromolecule	Inositol polyphosphate 1-phosphatase (protein)
Unique Ligands	GD, SO4

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6WRY \| pdb_00006wry	Download File View File

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM AFTER ADDITION OF INOSITOL 1,3,4-TRISPHOSPHATE AT 2.5 ANGSTROM RESOLUTION

Dollins, D.R., Endo-Streeter, S., York, J.D.

(2020) J Biological Chem 296: 100059-100059

Released	2020-11-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bos taurus
Macromolecule	Inositol polyphosphate 1-phosphatase (protein)
Unique Ligands	GD, SO4

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6X25 \| pdb_00006x25	Download File View File

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM AFTER ADDITION OF INOSITOL 1,3,4-TRISPHOSPHATE AND LITHIUM AT 3.2 ANGSTROM RESOLUTION

Dollins, D.E., Endo-Streeter, S., Ren, Y., York, J.D.

(2020) J Biological Chem 296: 100059-100059

Released	2020-11-25
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Bos taurus
Macromolecule	Inositol polyphosphate 1-phosphatase (protein)
Unique Ligands	GD, SO4

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7KIO \| pdb_00007kio	Download File View File

Crystal structure of inositol polyphosphate 1-phosphatase (INPP1) D54A mutant

Xiong, J.-P., Dollins, D.E., Ren, Y., York, J.D.

(2020) J Biological Chem 296: 100059-100059

Released	2020-11-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Bos taurus
Macromolecule	Inositol polyphosphate 1-phosphatase (protein)
Unique Ligands	CA, SO4

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7KIR \| pdb_00007kir	Download File View File

Crystal structure of inositol polyphosphate 1-phosphatase (INPP1) D54A mutant in complex with inositol (1,4)-bisphosphate

Dollins, D.E., Xiong, J.-P., Ren, Y., York, J.D.

(2020) J Biological Chem 296: 100059-100059

Released	2020-11-25
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus
Macromolecule	Inositol polyphosphate 1-phosphatase (protein)
Unique Ligands	2IP, CA

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8F9Y \| pdb_00008f9y	Download File View File

SAL1 from Arabidopsis thaliana

Frkic, R.L., Kaczmarski, J.A., Tan, L., Jackson, C.J.

(2016) Proc Natl Acad Sci U S A 113: E4567-E4576

Released	2023-01-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Arabidopsis thaliana
Macromolecule	SAL1 phosphatase (protein)
Unique Ligands	MG, PO4

1 to 13 of 13 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1INP | pdb_00001inp

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE AT 2.3 ANGSTROMS RESOLUTION

1JP4 | pdb_00001jp4

Crystal Structure of an Enzyme Displaying both Inositol-Polyphosphate 1-Phosphatase and 3'-Phosphoadenosine-5'-Phosphate Phosphatase Activities

2WEF | pdb_00002wef

Human 3'(2'), 5'-bisphosphate nucleotidase 1 (BPNT1) in complex with AMP, PO4 and Magnesium

4HXV | pdb_00004hxv

Crystal structure of 3'(2'),5'-bisphosphate nucleotidase1 from Entamoeba histolytica in complex with AMP and metal ions

4O7I | pdb_00004o7i

Structural and functional characterization of 3'(2'),5'-bisphosphate nucleotidase1 from Entamoeba histolytica

4QXD | pdb_00004qxd

Crystal structure of Inositol Polyphosphate 1-Phosphatase from Entamoeba histolytica

6WRO | pdb_00006wro

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM BUT NO LITHIUM AT 3 ANGSTROM RESOLUTION

6WRR | pdb_00006wrr

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM AND LITHIUM AT 2.5 ANGSTROM RESOLUTION

6WRY | pdb_00006wry

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM AFTER ADDITION OF INOSITOL 1,3,4-TRISPHOSPHATE AT 2.5 ANGSTROM RESOLUTION

6X25 | pdb_00006x25

CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM AFTER ADDITION OF INOSITOL 1,3,4-TRISPHOSPHATE AND LITHIUM AT 3.2 ANGSTROM RESOLUTION

7KIO | pdb_00007kio

Crystal structure of inositol polyphosphate 1-phosphatase (INPP1) D54A mutant

7KIR | pdb_00007kir

Crystal structure of inositol polyphosphate 1-phosphatase (INPP1) D54A mutant in complex with inositol (1,4)-bisphosphate

8F9Y | pdb_00008f9y

SAL1 from Arabidopsis thaliana

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1INP | pdb_00001inp

1JP4 | pdb_00001jp4

2WEF | pdb_00002wef

4HXV | pdb_00004hxv

4O7I | pdb_00004o7i

4QXD | pdb_00004qxd

6WRO | pdb_00006wro

6WRR | pdb_00006wrr

6WRY | pdb_00006wry

6X25 | pdb_00006x25

7KIO | pdb_00007kio

7KIR | pdb_00007kir

8F9Y | pdb_00008f9y