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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Thalictrum flavum subsp. glaucum"

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This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

Thalictrum flavum subsp. glaucum (17)

Taxonomy

Eukaryota (17)

Experimental Method

X-RAY DIFFRACTION (17)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	1.5 - 2.0 (12)
	2.0 - 2.5 (3)
	2.5 - 3.0 (2)

Release Date

	2015 - 2019 (16)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (13)
	Hydrolases (4)
	Lyases (4)

Symmetry Type

	Cyclic (12)
	Asymmetric (5)

SCOP Classification

	All alpha proteins (8)
	Alpha and beta proteins (a/b) (8)
	Artifacts (5)

AllSelected

1 to 17 of 17 Structures

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5ICC \| pdb_00005icc	Download File View File

Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine

Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.

(2016) Plant J 87: 641-653

Released	2016-06-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-norcoclaurine 6-O-methyltransferase (protein)
Unique Ligands	EDO, K, NA, SAH

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5ICE \| pdb_00005ice	Download File View File

Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine and norlaudanosoline

Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.

(2016) Plant J 87: 641-653

Released	2016-06-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-norcoclaurine 6-O-methyltransferase (protein)
Unique Ligands	2H4, EDO, K, SAH

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5ICF \| pdb_00005icf	Download File View File

Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine and sanguinarine

Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.

(2016) Plant J 87: 641-653

Released	2016-06-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-norcoclaurine 6-O-methyltransferase (protein)
Unique Ligands	DMS, EDO, K, NA, SAH, SAU

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5ICG \| pdb_00005icg	Download File View File

Crystal structure of apo (S)-norcoclaurine 6-O-methyltransferase

Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.

(2016) Plant J 87: 641-653

Released	2016-06-08
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-norcoclaurine 6-O-methyltransferase (protein)
Unique Ligands	K

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5KN4 \| pdb_00005kn4	Download File View File

Pavine N-methyltransferase apoenzyme pH 6.0

Torres, M.A., Hoffarth, E., Eugenio, L., Savtchouk, J., Chen, X., Morris, J., Facchini, P.J., Ng, K.K.S.

(2016) J Biological Chem 291: 23403-23415

Released	2016-09-07
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	Pavine N-methyltransferase (protein)

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5KOC \| pdb_00005koc	Download File View File

Pavine N-methyltransferase in complex with S-adenosylmethionine pH 7

Torres, M.A., Hoffarth, E., Savtchouk, J., Chen, X., Morris, J., Facchini, P.J., Ng, K.K.S.

(2016) J Biological Chem 291: 23403-23415

Released	2016-09-07
Method	X-RAY DIFFRACTION 2.293 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	Pavine N-methyltransferase (protein)
Unique Ligands	SAM

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5KOK \| pdb_00005kok	Download File View File

Pavine N-methyltransferase in complex with Tetrahydropapaverine and S-adenosylhomocysteine pH 7.25

Torres, M.A., Hoffarth, E., Eugenio, L., Savtchouk, J., Chen, X., Morris, J., Facchini, P.J., Ng, K.K.S.

(2016) J Biological Chem 291: 23403-23415

Released	2016-09-07
Method	X-RAY DIFFRACTION 1.792 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	Pavine N-methyltransferase (protein)
Unique Ligands	R9T, S9T, SAH

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5KPC \| pdb_00005kpc	Download File View File

Pavine N-methyltransferase H206A mutant in complex with S-adenosylmethionine pH 6

Torres, M.A., Hoffarth, E., Eugenio, L., Savtchouk, J., Chen, X., Morris, J., Facchini, P.J., Ng, K.K.S.

(2016) J Biological Chem 291: 23403-23415

Released	2016-09-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	Pavine N-methyltransferase (protein)
Unique Ligands	SAM

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5KPG \| pdb_00005kpg	Download File View File

Pavine N-methyltransferase in complex with S-adenosylhomocysteine pH 7

Torres, M.A., Hoffarth, E., Eugenio, L., Savtchouk, J., Chen, X., Morris, J., Facchini, P.J., Ng, K.K.S.

(2016) J Biological Chem 291: 23403-23415

Released	2016-09-07
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	Pavine N-methyltransferase (protein)
Unique Ligands	SAH

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5N8Q \| pdb_00005n8q	Download File View File

Structure of truncated Norcoclaurine Synthase from Thalictrum flavum

Sula, A., Lichman, B.R., Pesnot, T., Ward, J.M., Hailes, H.C., Keep, N.H.

(2017) Biochemistry 56: 5274-5277

Released	2017-09-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	S-norcoclaurine synthase (protein)

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5NON \| pdb_00005non	Download File View File

Structure of truncated Norcoclaurine Synthase from Thalictrum flavum with product mimic

Sula, A., Lichman, B.R., Pesnot, T., Ward, J.M., Hailes, H.C., Keep, N.H.

(2017) Biochemistry 56: 5274-5277

Released	2017-09-27
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	S-norcoclaurine synthase (protein)
Unique Ligands	93H

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6NEG \| pdb_00006neg	Download File View File

N191D, F205S mutant of scoulerine-9-O methyltransferase from Thalictrum flavum complexed with S-ADENOSYL-L-HOMOCYSTEINE

Valentic, T.R., Smolke, C.D., Payne, J.T.

To be published

Released	2019-12-18
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-scoulerine 9-O-methyltransferase (protein)
Unique Ligands	SAH

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6NEH \| pdb_00006neh	Download File View File

N191D, F205S mutant of scoulerine 9-O-methyltransferase from Thalictrum flavum complexed with (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol and S-ADENOSYL-L-HOMOCYSTEINE

Valentic, T.R., Smolke, C.D., Payne, J.T.

To be published

Released	2019-12-18
Method	X-RAY DIFFRACTION 1.52 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-scoulerine 9-O-methyltransferase (protein)
Unique Ligands	SAH, SLX

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6NEI \| pdb_00006nei	Download File View File

Scoulerine 9-O-methyltransferase from Thalictrum flavum

Valentic, T.R., Smolke, C.D., Payne, J.T.

To be published

Released	2019-12-18
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-scoulerine 9-O-methyltransferase (protein)
Unique Ligands	SO4

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6NEJ \| pdb_00006nej	Download File View File

scoulerine 9-O-methyltransferase from Thalictrum flavum complexed (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol and with S-ADENOSYL-L-HOMOCYSTEINE

Valentic, T.R., Smolke, C.D., Payne, J.T.

To be published

Released	2019-12-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	(S)-scoulerine 9-O-methyltransferase (protein)
Unique Ligands	SAH, SLX

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6RP3 \| pdb_00006rp3	Download File View File

Truncated Norcoclaurine synthase with reaction intermediate mimic

Keep, N.H., Roddan, R., Sula, A.

(2019) ACS Catal

Released	2019-10-09
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	S-norcoclaurine synthase (protein)
Unique Ligands	EDO, KCZ

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6Z82 \| pdb_00006z82	Download File View File

Thalictrum flavumn Norcoclaurine synthase point mutant in complex with a transition state analoge

Roddan, R., Sula, A., Keep, N.H.

(2020) Commun Chem

Released	2020-12-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thalictrum flavum subsp. glaucum
Macromolecule	S-norcoclaurine synthase (protein)
Unique Ligands	QBW

1 to 17 of 17 Structures

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5ICC | pdb_00005icc

Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine

5ICE | pdb_00005ice

Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine and norlaudanosoline

5ICF | pdb_00005icf

Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine and sanguinarine

5ICG | pdb_00005icg

Crystal structure of apo (S)-norcoclaurine 6-O-methyltransferase

5KN4 | pdb_00005kn4

Pavine N-methyltransferase apoenzyme pH 6.0

5KOC | pdb_00005koc

Pavine N-methyltransferase in complex with S-adenosylmethionine pH 7

5KOK | pdb_00005kok

Pavine N-methyltransferase in complex with Tetrahydropapaverine and S-adenosylhomocysteine pH 7.25

5KPC | pdb_00005kpc

Pavine N-methyltransferase H206A mutant in complex with S-adenosylmethionine pH 6

5KPG | pdb_00005kpg

Pavine N-methyltransferase in complex with S-adenosylhomocysteine pH 7

5N8Q | pdb_00005n8q

Structure of truncated Norcoclaurine Synthase from Thalictrum flavum

5NON | pdb_00005non

Structure of truncated Norcoclaurine Synthase from Thalictrum flavum with product mimic

6NEG | pdb_00006neg

N191D, F205S mutant of scoulerine-9-O methyltransferase from Thalictrum flavum complexed with S-ADENOSYL-L-HOMOCYSTEINE

6NEH | pdb_00006neh

N191D, F205S mutant of scoulerine 9-O-methyltransferase from Thalictrum flavum complexed with (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol and S-ADENOSYL-L-HOMOCYSTEINE

6NEI | pdb_00006nei

Scoulerine 9-O-methyltransferase from Thalictrum flavum

6NEJ | pdb_00006nej

scoulerine 9-O-methyltransferase from Thalictrum flavum complexed (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol and with S-ADENOSYL-L-HOMOCYSTEINE

6RP3 | pdb_00006rp3

Truncated Norcoclaurine synthase with reaction intermediate mimic

6Z82 | pdb_00006z82

Thalictrum flavumn Norcoclaurine synthase point mutant in complex with a transition state analoge

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

5ICC | pdb_00005icc

5ICE | pdb_00005ice

5ICF | pdb_00005icf

5ICG | pdb_00005icg

5KN4 | pdb_00005kn4

5KOC | pdb_00005koc

5KOK | pdb_00005kok

5KPC | pdb_00005kpc

5KPG | pdb_00005kpg

5N8Q | pdb_00005n8q

5NON | pdb_00005non

6NEG | pdb_00006neg

6NEH | pdb_00006neh

6NEI | pdb_00006nei

6NEJ | pdb_00006nej

6RP3 | pdb_00006rp3

6Z82 | pdb_00006z82