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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Medicago truncatula"

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Search Summary

This query matches 89 Structures.

Refinements

Structure Determination Methodology

experimental (89)

Scientific Name of Source Organism

Medicago truncatula (89)

Taxonomy

Eukaryota (89)

Experimental Method

	X-RAY DIFFRACTION (81)
	SOLUTION NMR (6)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

	Protein (89)
	DNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (11)
	1.5 - 2.0 (27)
	2.0 - 2.5 (29)
	2.5 - 3.0 (14)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (10)
	2010 - 2014 (13)
	2015 - 2019 (33)
	2020 - 2024 (33)

Enzyme Classification Name

	Transferases (32)
	Hydrolases (17)
	Oxidoreductases (11)
	Lyases (5)
	Isomerases (2)
	Ligases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Cyclic (38)
	Asymmetric (26)
	Dihedral (22)
	Octahedral (5)

SCOP Classification

	Alpha and beta proteins (a+b) (14)
	Alpha and beta proteins (a/b) (26)
	All alpha proteins (11)
	Multi-domain proteins (alpha and beta) (5)
	All beta proteins (2)
	Artifacts (5)

AllSelected

1 to 25 of 89 Structures

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1ZG3 \| pdb_00001zg3	Download File View File

Crystal structure of the isoflavanone 4'-O-methyltransferase complexed with SAH and 2,7,4'-trihydroxyisoflavanone

Liu, C.-J., Deavours, B.E., Richard, S., Ferrer, J.-L., Dixon, R.A., Noel, J.P.

(2006) Plant Cell 18: 3656-3669

Released	2006-08-01
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Medicago truncatula
Macromolecule	isoflavanone 4'-O-methyltransferase (protein)
Unique Ligands	2HI, SAH

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1ZGA \| pdb_00001zga	Download File View File

Crystal structure of isoflavanone 4'-O-methyltransferase complexed with (+)-6a-hydroxymaackiain

Liu, C.-J., Deavours, B.E., Richard, S., Ferrer, J.-L., Dixon, R.A., Noel, J.P.

(2006) Plant Cell 18: 3656-3669

Released	2006-08-01
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Medicago truncatula
Macromolecule	Isoflavanone 4'-O-methyltransferase' (protein)
Unique Ligands	HMK, SAH

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1ZGJ \| pdb_00001zgj	Download File View File

Crystal structure of isoflavanone 4'-O-methyltransferase complexed with (+)-pisatin

Liu, C.-J., Deavours, B.E., Richard, S., Ferrer, J.-L., Dixon, R.A., Noel, J.P.

(2006) Plant Cell 18: 3656-3669

Released	2006-08-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Medicago truncatula
Macromolecule	Isoflavanone 4'-O-methyltransferase' (protein)
Unique Ligands	P1S, SAH

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1ZHF \| pdb_00001zhf	Download File View File

Crystal structure of selenomethionine substituted isoflavanone 4'-O-methyltransferase

Liu, C.-J., Deavours, B.E., Richard, S., Ferrer, J.-L., Dixon, R.A., Noel, J.P.

(2006) Plant Cell 18: 3656-3669

Released	2006-08-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Medicago truncatula
Macromolecule	Isoflavanone 4'-O-methyltransferase (protein)
Unique Ligands	SAH

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2ACV \| pdb_00002acv	Download File View File

Crystal Structure of Medicago truncatula UGT71G1

Shao, H., He, X., Achnine, L., Blount, J.W., Dixon, R.A., Wang, X.

(2005) Plant Cell 17: 3141-3154

Released	2005-11-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Medicago truncatula
Macromolecule	triterpene UDP-glucosyl transferase UGT71G1 (protein)
Unique Ligands	UDP

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2ACW \| pdb_00002acw	Download File View File

Crystal Structure of Medicago truncatula UGT71G1 complexed with UDP-glucose

Shao, H., He, X., Achnine, L., Blount, J.W., Dixon, R.A., Wang, X.

(2005) Plant Cell 17: 3141-3154

Released	2005-11-15
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Medicago truncatula
Macromolecule	triterpene UDP-glucosyl transferase UGT71G1 (protein)
Unique Ligands	UPG

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2LR3 \| pdb_00002lr3	Download File View File

Solution structure of the anti-fungal defensin DEF4 (MTR_8g070770) from Medicago truncatula (barrel clover)

Buchko, G.W., Smith, T.J., Shah, D.M.

(2013) PLoS One 8: e82485-e82485

Released	2012-09-26
Method	SOLUTION NMR
Organisms	Medicago truncatula
Macromolecule	Defensin (protein)

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2MFO \| pdb_00002mfo	Download File View File

Solution structure of the C-terminally encoded peptide of the model plant host Medicago truncatula - CEP1

Bobay, B.G., DiGennaro, P., Bird, D.M.

(2013) FEBS Lett 587: 3979-3985

Released	2013-12-11
Method	SOLUTION NMR
Organisms	Medicago truncatula
Macromolecule	CEP1 (protein)

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2PQ6 \| pdb_00002pq6	Download File View File

Crystal structure of Medicago truncatula UGT85H2- Insights into the structural basis of a multifunctional (Iso) flavonoid glycosyltransferase

Li, L., Modolo, L.V., Escamilla-Trevino, L.L., Wang, X.

(2007) J Mol Biology 370: 951-963

Released	2007-07-10
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Medicago truncatula
Macromolecule	UDP-glucuronosyl/UDP-glucosyltransferase (protein)

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2QYO \| pdb_00002qyo	Download File View File

Crystal structure of isoflavone O-methyltransferase homolog in complex with biochanin A and SAH

Wang, C., Yu, X.-H., Liu, C.-J.

To be published

Released	2008-08-26
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Medicago truncatula
Macromolecule	O-methyltransferase (protein)
Unique Ligands	K, QSO, SAH

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3HBF \| pdb_00003hbf	Download File View File

Structure of UGT78G1 complexed with myricetin and UDP

Wang, X., Modolo, L., Li, L., Dixon, R.

(2009) J Mol Biology 392: 1292-1302

Released	2009-09-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Medicago truncatula
Macromolecule	Flavonoid 3-O-glucosyltransferase (protein)
Unique Ligands	MYC, UDP

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3HBJ \| pdb_00003hbj	Download File View File

Structure of UGT78G1 complexed with UDP

Wang, X., Modolo, L., Li, L., Dixon, R.

(2009) J Mol Biology 392: 1292-1302

Released	2009-09-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Medicago truncatula
Macromolecule	Flavonoid 3-O-glucosyltransferase (protein)
Unique Ligands	UDP

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3US6 \| pdb_00003us6	Download File View File

Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt1 from Medicago truncatula

Ruszkowski, M., Brzezinski, K., Jedrzejczak, R., Dauter, M., Dauter, Z., Sikorski, M., Jaskolski, M.

(2013) FEBS J 280: 3709-3720

Released	2012-01-18
Method	X-RAY DIFFRACTION 1.446 Å
Organisms	Medicago truncatula
Macromolecule	Histidine-containing Phosphotransfer Protein type 1, MtHPt1 (protein)

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4G78 \| pdb_00004g78	Download File View File

Subatomic Resolution Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt2 from Medicago truncatula

Ruszkowski, M., Sikorski, M., Jaskolski, M.

To be published

Released	2013-07-24
Method	X-RAY DIFFRACTION 0.92 Å
Organisms	Medicago truncatula
Macromolecule	Histidine phosphotransfer protein (protein)

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4GY9 \| pdb_00004gy9	Download File View File

Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with N6-isopentenyladenine (2iP)

Ruszkowski, M., Sikorski, M., Jaskolski, M.

(2013) Acta Crystallogr D Biol Crystallogr 69: 2365-2380

Released	2013-09-04
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Medicago truncatula
Macromolecule	MtN13 protein (protein)
Unique Ligands	MLI, NA, ZIP

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4IS4 \| pdb_00004is4	Download File View File

The glutamine synthetase from the dicotyledonous plant M. truncatula is a decamer

Seabra, A.R., Carvalho, H., Pereira, P.J.B.

(2014) Acta Crystallogr D Biol Crystallogr 70: 981-993

Released	2014-04-09
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Medicago truncatula
Macromolecule	Glutamine synthetase (protein)

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4JHG \| pdb_00004jhg	Download File View File

Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin

Ruszkowski, M., Tusnio, K., Ciesielska, A., Brzezinski, K., Dauter, M., Dauter, Z., Sikorski, M., Jaskolski, M.

(2013) Acta Crystallogr D Biol Crystallogr 69: 2365-2380

Released	2013-03-20
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Medicago truncatula
Macromolecule	MtN13 protein (protein)
Unique Ligands	MLI, NA, ZEA

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4JHH \| pdb_00004jhh	Download File View File

Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with kinetin

Ruszkowski, M., Sikorski, M., Jaskolski, M.

(2013) Acta Crystallogr D Biol Crystallogr 69: 2365-2380

Released	2013-12-04
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Medicago truncatula
Macromolecule	MtN13 protein (protein)
Unique Ligands	H35, MLI, NA

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4JHI \| pdb_00004jhi	Download File View File

Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with N6-benzyladenine

Ruszkowski, M., Sikorski, M., Jaskolski, M.

(2013) Acta Crystallogr D Biol Crystallogr 69: 2365-2380

Released	2013-12-04
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Medicago truncatula
Macromolecule	MtN13 protein (protein)
Unique Ligands	EMU, NA

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4Q0K \| pdb_00004q0k	Download File View File

Crystal Structure of Phytohormone Binding Protein from Medicago truncatula in complex with gibberellic acid (GA3)

Ciesielska, A., Barciszewski, J., Ruszkowski, M., Jaskolski, M., Sikorski, M.

(2014) Acta Crystallogr D Biol Crystallogr 70: 2032-2041

Released	2014-04-23
Method	X-RAY DIFFRACTION 1.34 Å
Organisms	Medicago truncatula
Macromolecule	PHYTOHORMONE BINDING PROTEIN MTPHBP (protein)
Unique Ligands	GA3, GOL

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4QTZ \| pdb_00004qtz	Download File View File

Crystal Structure of Cinnamyl-Alcohol Dehydrogenase 2

Pan, H., Wang, X.

(2014) Plant Cell 26: 3709-3727

Released	2014-10-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Medicago truncatula
Macromolecule	Dihydroflavonol-4-reductase (protein)

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4QUK \| pdb_00004quk	Download File View File

Crystal Structure of Cinnamyl-Alcohol Dehydrogenase 2 Mutant K169A

Pan, H., Wang, X.

(2014) Plant Cell 26: 3709-3727

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Medicago truncatula
Macromolecule	Dihydroflavonol-4-reductase (protein)

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4R1U \| pdb_00004r1u	Download File View File

Crystal structure of Medicago truncatula cinnamoyl-CoA reductase

Noel, J.P., Bomati, E.K., Louie, G.V., Bowman, M.E.

(2014) Plant Cell 26: 3709-3727

Released	2014-10-01
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Medicago truncatula
Macromolecule	Cinnamoyl CoA reductase (protein)
Unique Ligands	ACT

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5BSE \| pdb_00005bse	Download File View File

Crystal structure of Medicago truncatula (delta)1-Pyrroline-5-Carboxylate Reductase (MtP5CR)

Ruszkowski, M., Nocek, B., Forlani, G., Dauter, Z.

(2015) Front Plant Sci 6: 869-869

Released	2015-11-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Medicago truncatula
Macromolecule	Pyrroline-5-carboxylate reductase (protein)
Unique Ligands	CL, MPO

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5BSF \| pdb_00005bsf	Download File View File

Crystal structure of Medicago truncatula (delta)1-Pyrroline-5-Carboxylate Reductase (MtP5CR) in complex with NAD+

Ruszkowski, M., Nocek, B., Forlani, G., Dauter, Z.

(2015) Front Plant Sci 6: 869-869

Released	2015-11-11
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Medicago truncatula
Macromolecule	Pyrroline-5-carboxylate reductase (protein)
Unique Ligands	CL, MPO, NAD

1 to 25 of 89 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ZG3 | pdb_00001zg3

1ZGA | pdb_00001zga

1ZGJ | pdb_00001zgj

1ZHF | pdb_00001zhf

2ACV | pdb_00002acv

2ACW | pdb_00002acw

2LR3 | pdb_00002lr3

2MFO | pdb_00002mfo

2PQ6 | pdb_00002pq6

2QYO | pdb_00002qyo

3HBF | pdb_00003hbf

3HBJ | pdb_00003hbj

3US6 | pdb_00003us6

4G78 | pdb_00004g78

4GY9 | pdb_00004gy9

4IS4 | pdb_00004is4

4JHG | pdb_00004jhg

4JHH | pdb_00004jhh

4JHI | pdb_00004jhi

4Q0K | pdb_00004q0k

4QTZ | pdb_00004qtz

4QUK | pdb_00004quk

4R1U | pdb_00004r1u

5BSE | pdb_00005bse

5BSF | pdb_00005bsf