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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "AIM"

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Search Summary

This query matches 52 Structures.

Refinements

Structure Determination Methodology

experimental (52)

Scientific Name of Source Organism

	Rattus norvegicus (51)
	Aequorea victoria (2)
	Canavalia ensiformis (2)
	Homo sapiens (2)

Taxonomy

Eukaryota (52)

Experimental Method

	ELECTRON MICROSCOPY (30)
	X-RAY DIFFRACTION (22)

Polymer Entity Type

Protein (52)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (9)
	2.0 - 2.5 (2)
	2.5 - 3.0 (6)
	3.0 - 3.5 (9)
	3.5 - 4.0 (11)
	4.0 - 4.5 (4)
	> 4.5 (5)

Release Date

	2005 - 2009 (14)
	2010 - 2014 (5)
	2015 - 2019 (4)
	2020 - 2024 (29)

Membrane Protein Annotation

	PDBTM (23)
	mpstruc (18)
	MemProtMD (15)
	OPM (12)

Symmetry Type

	Cyclic (39)
	Asymmetric (15)

SCOP Classification

	Alpha and beta proteins (a/b) (19)
	Artifacts (3)

AllSelected

1 to 25 of 52 Structures

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1S7Y \| pdb_00001s7y	Download File View File

Crystal structure of the GluR6 ligand binding core in complex with glutamate at 1.75 A resolution orthorhombic form

Mayer, M.L.

(2005) Neuron 45: 539-552

Released	2005-02-08
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 precursor (protein)
Unique Ligands	GLU

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1S9T \| pdb_00001s9t	Download File View File

Crystal structure of the GLUR6 ligand binding core in complex with quisqualate at 1.8A resolution

Mayer, M.L.

(2005) Neuron 45: 539-552

Released	2005-02-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CL, QUS

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1SD3 \| pdb_00001sd3	Download File View File

Crystal structure of the GLUR6 ligand binding core in complex with 2S,4R-4-methylglutamate at 1.8 Angstrom resolution

Mayer, M.L.

(2005) Neuron 45: 539-552

Released	2005-02-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	SYM

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1TT1 \| pdb_00001tt1	Download File View File

CRYSTAL STRUCTURE OF THE GLUR6 LIGAND BINDING CORE IN COMPLEX WITH KAINATE 1.93 A RESOLUTION

Mayer, M.L.

(2005) Neuron 45: 539-552

Released	2005-02-08
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	KAI

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2I0B \| pdb_00002i0b	Download File View File

Crystal structure of the GluR6 ligand binding core ELKQ mutant dimer at 1.96 Angstroms Resolution

Mayer, M.L.

(2006) Nat Struct Mol Biol 13: 1120-1127

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	GLU, SO4

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2I0C \| pdb_00002i0c	Download File View File

Crystal structure of the GluR6 ligand binding core dimer crosslinked by disulfide bonds between Y490C and L752C at 2.25 Angstroms Resolution

Mayer, M.L.

(2006) Nat Struct Mol Biol 13: 1120-1127

Released	2006-11-21
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	GLU

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3G3F \| pdb_00003g3f	Download File View File

Crystal structure of the GluR6 ligand binding domain dimer with glutamate and NaCl at 1.38 Angstrom resolution

Chaudhry, C., Mayer, M.L.

(2009) EMBO J 28: 1518-1530

Released	2009-06-02
Method	X-RAY DIFFRACTION 1.377 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CL, GLU, IPA, NA

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3G3G \| pdb_00003g3g	Download File View File

Crystal structure of the GluR6 ligand binding domain dimer K665R mutant with glutamate and NaCl at 1.3 Angstrom resolution

Chaudhry, C., Mayer, M.L.

(2009) EMBO J 28: 1518-1530

Released	2009-06-02
Method	X-RAY DIFFRACTION 1.303 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CL, GLU, NA

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3G3H \| pdb_00003g3h	Download File View File

Crystal structure of the GluR6 ligand binding domain dimer K665R I749L Q753K mutant with glutamate and NaCl at 1.5 Angstrom resolution

Chaudhry, C., Mayer, M.L.

(2009) EMBO J 28: 1518-1530

Released	2009-06-02
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CL, GLU, NA

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3G3I \| pdb_00003g3i	Download File View File

Crystal structure of the GluR6 ligand binding domain dimer I442H K494E I749L Q753K mutant with glutamate and NaCl at 1.37 Angstrom resolution

Chaudhry, C., Mayer, M.L.

(2009) EMBO J 28: 1518-1530

Released	2009-06-02
Method	X-RAY DIFFRACTION 1.371 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CL, GLU, NA

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3G3J \| pdb_00003g3j	Download File View File

Crystal structure of the GluR6 ligand binding domain dimer I442H K494E K665R I749L Q753K mutant with glutamate and NaCl at 1.32 Angstrom resolution

Chaudhry, C., Mayer, M.L.

(2009) EMBO J 28: 1518-1530

Released	2009-06-02
Method	X-RAY DIFFRACTION 1.321 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CL, GLU, NA

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3G3K \| pdb_00003g3k	Download File View File

Crystal structure of the GluR6 ligand binding domain dimer I442H K494E K665R I749L Q753K E757Q mutant with glutamate and NaCl at 1.24 Angstrom resolution

Chaudhry, C., Mayer, M.L.

(2009) EMBO J 28: 1518-1530

Released	2009-06-02
Method	X-RAY DIFFRACTION 1.24 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CL, GLU, IPA, NA

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3H6G \| pdb_00003h6g	Download File View File

Crystal structure of the GluR6 amino terminal domain dimer assembly

Kumar, J., Mayer, M.L.

(2009) Nat Struct Mol Biol 16: 631-638

Released	2009-05-26
Method	X-RAY DIFFRACTION 2.697 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CA, NAG, TLA

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3H6H \| pdb_00003h6h	Download File View File

Crystal structure of the GluR6 amino terminal domain dimer assembly MPD form

Kumar, J., Mayer, M.L.

(2009) Nat Struct Mol Biol 16: 631-638

Released	2009-05-26
Method	X-RAY DIFFRACTION 2.901 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	CA, NAG

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3QLT \| pdb_00003qlt	Download File View File

Crystal structure of a GluK2 (GluR6) glycan wedge homodimer assembly

Kumar, J., Mayer, M.L.

(2011) Neuron 71: 319-331

Released	2011-08-03
Method	X-RAY DIFFRACTION 2.988 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	NAG

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3QLU \| pdb_00003qlu	Download File View File

Crystal structure of the GluK2/GluK5 (GluR6/KA2) ATD dimer assembly

Kumar, J., Mayer, M.L.

(2011) Neuron 71: 319-331

Released	2011-08-03
Method	X-RAY DIFFRACTION 2.906 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein) Glutamate receptor, ionotropic kainate 5 (protein)
Unique Ligands	CL, GOL, NAG

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3QLV \| pdb_00003qlv	Download File View File

Crystal structure of the GluK2/GluK5 (GluR6/KA2) ATD tetramer assembly

Kumar, J., Mayer, M.L.

(2011) Neuron 71: 319-331

Released	2011-08-03
Method	X-RAY DIFFRACTION 3.94 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein) Glutamate receptor, ionotropic kainate 5 (protein)

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3QXM \| pdb_00003qxm	Download File View File

Crystal Structure of Human GluK2 Ligand-Binding Core in Complex with Novel Marine-Derived Toxins, Neodysiherbaine A

Unno, M., Sasaki, M., Ikeda-Saito, M.

(2011) J Mol Biology 413: 667-683

Released	2011-10-26
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Glutamate receptor ionotropic, kainate 2 (protein)
Unique Ligands	NDZ

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4H8I \| pdb_00004h8i	Download File View File

Structure of GluK2-LBD in complex with GluAzo

Reiter, A., Skerra, A., Trauner, D., Schiefner, A.

(2013) Biochemistry 52: 8972-8974

Released	2013-09-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor, ionotropic kainate 2 (protein)
Unique Ligands	11W, CL, MES, SO4

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5CMK \| pdb_00005cmk	Download File View File

Crystal structure of the GluK2EM LBD dimer assembly complex with glutamate and LY466195

Chittori, S., Mayer, M.L.

(2016) Nature 537: 567-571

Released	2016-07-20
Method	X-RAY DIFFRACTION 1.801 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 2 (protein)
Unique Ligands	CL, GLU, LI, LY5, SO4

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5CMM \| pdb_00005cmm	Download File View File

Crystal structure of the GluK2EM LBD dimer assembly complex with 2S,4R-4-methylglutamate

Chittori, S., Mayer, M.L.

(2016) Nature 537: 567-571

Released	2016-07-20
Method	X-RAY DIFFRACTION 1.271 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 2 (protein)
Unique Ligands	SYM

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5KUF \| pdb_00005kuf	Download File View File

GluK2EM with 2S,4R-4-methylglutamate

Meyerson, J.R., Chittori, S., Merk, A., Rao, P., Han, T.H., Serpe, M., Mayer, M.L., Subramaniam, S.

(2016) Nature 537: 567-571

Released	2016-09-07
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 2 (protein)
Unique Ligands	SYM

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5KUH \| pdb_00005kuh	Download File View File

GluK2EM with LY466195

Meyerson, J.R., Chittori, S., Merk, A., Rao, P., Han, T.H., Serpe, M., Mayer, M.L., Subramaniam, S.

(2016) Nature 537: 567-571

Released	2016-09-07
Method	ELECTRON MICROSCOPY 11.6 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 2 (protein)
Unique Ligands	LY5

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7F56 \| pdb_00007f56	Download File View File

DNQX-bound GluK2-1xNeto2 complex, with asymmetric LBD

He, L.L., Gao, Y.W., Li, B., Zhao, Y.

(2021) Nature 599: 325-329

Released	2021-09-29
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 2 (protein) Neuropilin and tolloid-like protein 2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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7F57 \| pdb_00007f57	Download File View File

Kainate-bound GluK2-1xNeto2 complex, at the desensitized state

He, L.L., Gao, Y.W., Li, B., Zhao, Y.

(2021) Nature 599: 325-329

Released	2021-09-29
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, kainate 2 (protein) Neuropilin and tolloid-like protein 2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

1 to 25 of 52 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1S7Y | pdb_00001s7y

1S9T | pdb_00001s9t

1SD3 | pdb_00001sd3

1TT1 | pdb_00001tt1

2I0B | pdb_00002i0b

2I0C | pdb_00002i0c

3G3F | pdb_00003g3f

3G3G | pdb_00003g3g

3G3H | pdb_00003g3h

3G3I | pdb_00003g3i

3G3J | pdb_00003g3j

3G3K | pdb_00003g3k

3H6G | pdb_00003h6g

3H6H | pdb_00003h6h

3QLT | pdb_00003qlt

3QLU | pdb_00003qlu

3QLV | pdb_00003qlv

3QXM | pdb_00003qxm

4H8I | pdb_00004h8i

5CMK | pdb_00005cmk

5CMM | pdb_00005cmm

5KUF | pdb_00005kuf

5KUH | pdb_00005kuh

7F56 | pdb_00007f56

7F57 | pdb_00007f57