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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Magnetococcus marinus MC-1 (10)
	Homo sapiens (7)
	synthetic construct (3)
	Gallus gallus (2)
	Saccharomyces cerevisiae (1)

Taxonomy

	Bacteria (10)
	Eukaryota (10)
	other sequences (3)

Experimental Method

	X-RAY DIFFRACTION (11)
	SOLUTION NMR (9)

Polymer Entity Type

	Protein (20)
	RNA (3)

Refinement Resolution (Å)

	2.0 - 2.5 (6)
	2.5 - 3.0 (4)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (5)
	2010 - 2014 (3)
	2015 - 2019 (2)
	2020 - 2024 (10)

Membrane Protein Annotation

	PDBTM (10)
	MemProtMD (9)
	OPM (7)
	mpstruc (6)

Symmetry Type

	Cyclic (10)
	Asymmetric (10)

SCOP Classification

	Alpha and beta proteins (a+b) (4)
	Artifacts (2)
	All alpha proteins (1)

AllSelected

1 to 20 of 20 Structures

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Explore in 3D

2BF0 \| pdb_00002bf0	Download File View File

crystal structure of the rpr of pcf11

Noble, C.G., Hollingworth, D., Martin, S.R., Adeniran, V.E., Smerdon, S.J., Kelly, G., Taylor, I.A., Ramos, A.

(2005) Nat Struct Mol Biol 12: 144

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PCF11 (protein)
Unique Ligands	CA

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2BKD \| pdb_00002bkd	Download File View File

Structure of the N-terminal domain of Fragile X Mental Retardation Protein

Ramos, A., Hollingworth, D., Adinolfi, S., Castets, M., Kelly, G., Frenkiel, T.A., Bardoni, B., Pastore, A.

(2006) Structure 14: 21-31

Released	2006-01-18
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Fragile X messenger ribonucleoprotein 1 (protein)

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2JVZ \| pdb_00002jvz	Download File View File

Solution NMR Structure of the Second and Third KH Domains of KSRP

Diaz-Moreno, I., Hollingworth, D., Garcia-Mayoral, M.F., Kelly, G., Cukier, C.D., Ramos, A.

(2007) To be published

Released	2009-02-17
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Far upstream element-binding protein 2 (protein)

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2KXF \| pdb_00002kxf	Download File View File

Solution structure of the first two RRM domains of FBP-interacting repressor (FIR)

Cukier, C.D., Ramos, A., Hollingworth, D., Diaz-Moreno, I., Kelly, G.

(2010) Nat Struct Mol Biol 17: 1058-1064

Released	2010-08-18
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Poly(U)-binding-splicing factor PUF60 (protein)

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2KXH \| pdb_00002kxh	Download File View File

Solution structure of the first two RRM domains of FIR in the complex with FBP Nbox peptide

Cukier, C.D., Ramos, A., Hollingworth, D., Diaz-Moreno, I., Kelly, G.

(2010) Nat Struct Mol Biol 17: 1058-1064

Released	2010-08-18
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Poly(U)-binding-splicing factor PUF60 (protein) peptide of Far upstream element-binding protein 1 (protein)

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2N8L \| pdb_00002n8l	Download File View File

Zipcode-binding-protein-1 KH3KH4(DD) domains in complex with the KH3 RNA target

Nicastro, G., Candel, A.M., Ramos, A., Hollingworth, D.

To be published

Released	2017-01-25
Method	SOLUTION NMR
Organisms	Gallus gallus synthetic construct
Macromolecule	Insulin-like growth factor 2 mRNA-binding protein 1 (protein) RNA (5'-R(PGPCPAPCPAPCPCPC)-3') (nucleic acid)

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2N8M \| pdb_00002n8m	Download File View File

Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the KH4 RNA target

Nicastro, G., Ramos, A., Candel, A., Hollingworth, D.

To be published

Released	2017-01-25
Method	SOLUTION NMR
Organisms	Gallus gallus synthetic construct
Macromolecule	Insulin-like growth factor 2 mRNA-binding protein 1 (protein) RNA (5'-R(PUPCPGPGPAPCP*U)-3') (nucleic acid)

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2OPU \| pdb_00002opu	Download File View File

Solution NMR Structure of the First Domain of KSRP

Diaz-Moreno, I., Ramos, A., Garcia-Mayoral, M.F., Hollingworth, D.

(2009) Nat Struct Mol Biol 16: 238-246

Released	2008-02-26
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	KHSRP protein (protein)

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2OPV \| pdb_00002opv	Download File View File

Solution NMR Structure of the Second Domain of KSRP

Diaz-Moreno, I., Ramos, A., Garcia-Mayoral, M.F., Hollingworth, D.

To be published

Released	2008-02-26
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	KHSRP protein (protein)

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4B8T \| pdb_00004b8t	Download File View File

RNA BINDING PROTEIN Solution structure of the third KH domain of KSRP in complex with the G-rich target sequence.

Nicastro, G., Garcia-Mayoral, M.F., Hollingworth, D., Kelly, G., Martin, S.R., Briata, P., Gherzi, R., Ramos, A.

(2012) Nat Struct Mol Biol 19: 1282

Released	2012-11-07
Method	SOLUTION NMR
Organisms	Homo sapiens synthetic construct
Macromolecule	KH-TYPE SPLICING REGULATORY PROTEIN (protein) 5'-R(APGPGPGP*UP)-3' (nucleic acid)

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6SX5 \| pdb_00006sx5	Download File View File

Full length Mutant Open-form Sodium Channel NavMs

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

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6SX7 \| pdb_00006sx7	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) (2.2 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, ME2, NA

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6SXC \| pdb_00006sxc	Download File View File

Crystal structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with 4-hydroxytamoxifen (2.5 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA, OHT

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6SXE \| pdb_00006sxe	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with Endoxifen (2.6 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, 7PG, 9XY, NA

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6SXF \| pdb_00006sxf	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with Tamoxifen (2.8 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.839 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, CTX, NA

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6SXG \| pdb_00006sxg	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs in complex with 4-hydroxytamoxifen (2.4 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA, OHT

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6YZ0 \| pdb_00006yz0	Download File View File

Full length Open-form Sodium Channel NavMs F208L in complex with Cannabidiol (CBD)

Sula, A., Sait, L.G., Hollingworth, D., Wallace, B.A.

(2020) Elife 9:

Released	2020-11-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, CD0, NA

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6YZ2 \| pdb_00006yz2	Download File View File

Full length Open-form Sodium Channel NavMs F208L

Sula, A., Sait, L.G., Hollingworth, D., Wallace, B.A.

(2020) Elife 9:

Released	2020-11-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

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6Z8C \| pdb_00006z8c	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with N-desmethyltamoxifen (3.2 A resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA, QBN

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8S6J \| pdb_00008s6j	Download File View File

NavMs in complex with riluzole

Hollingworth, D., Sula, A., Mykhaylyk, V., Wallace, B.A.

(2024) Nat Commun 15: 8426-8426

Released	2024-09-18
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, 657, CL, NA, PG6

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2BF0 | pdb_00002bf0

crystal structure of the rpr of pcf11

2BKD | pdb_00002bkd

Structure of the N-terminal domain of Fragile X Mental Retardation Protein

2JVZ | pdb_00002jvz

Solution NMR Structure of the Second and Third KH Domains of KSRP

2KXF | pdb_00002kxf

Solution structure of the first two RRM domains of FBP-interacting repressor (FIR)

2KXH | pdb_00002kxh

Solution structure of the first two RRM domains of FIR in the complex with FBP Nbox peptide

2N8L | pdb_00002n8l

Zipcode-binding-protein-1 KH3KH4(DD) domains in complex with the KH3 RNA target

2N8M | pdb_00002n8m

Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the KH4 RNA target

2OPU | pdb_00002opu

Solution NMR Structure of the First Domain of KSRP

2OPV | pdb_00002opv

Solution NMR Structure of the Second Domain of KSRP

4B8T | pdb_00004b8t

RNA BINDING PROTEIN Solution structure of the third KH domain of KSRP in complex with the G-rich target sequence.

6SX5 | pdb_00006sx5

Full length Mutant Open-form Sodium Channel NavMs

6SX7 | pdb_00006sx7

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) (2.2 Angstrom resolution)

6SXC | pdb_00006sxc

Crystal structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with 4-hydroxytamoxifen (2.5 Angstrom resolution)

6SXE | pdb_00006sxe

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with Endoxifen (2.6 Angstrom resolution)

6SXF | pdb_00006sxf

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with Tamoxifen (2.8 Angstrom resolution)

6SXG | pdb_00006sxg

Crystal Structure of the Voltage-Gated Sodium Channel NavMs in complex with 4-hydroxytamoxifen (2.4 Angstrom resolution)

6YZ0 | pdb_00006yz0

Full length Open-form Sodium Channel NavMs F208L in complex with Cannabidiol (CBD)

6YZ2 | pdb_00006yz2

Full length Open-form Sodium Channel NavMs F208L

6Z8C | pdb_00006z8c

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with N-desmethyltamoxifen (3.2 A resolution)

8S6J | pdb_00008s6j

NavMs in complex with riluzole

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2BF0 | pdb_00002bf0

2BKD | pdb_00002bkd

2JVZ | pdb_00002jvz

2KXF | pdb_00002kxf

2KXH | pdb_00002kxh

2N8L | pdb_00002n8l

2N8M | pdb_00002n8m

2OPU | pdb_00002opu

2OPV | pdb_00002opv

4B8T | pdb_00004b8t

6SX5 | pdb_00006sx5

6SX7 | pdb_00006sx7

6SXC | pdb_00006sxc

6SXE | pdb_00006sxe

6SXF | pdb_00006sxf

6SXG | pdb_00006sxg

6YZ0 | pdb_00006yz0

6YZ2 | pdb_00006yz2

6Z8C | pdb_00006z8c

8S6J | pdb_00008s6j