RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Singleton, M.R."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 113 Structures.

Refinements

Structure Determination Methodology

experimental (113)

Scientific Name of Source Organism

	Homo sapiens (65)
	Mus musculus (8)
	Influenza A virus (A/Japan/305/1957(H2N2)) (7)
	Influenza A virus (A/Shanghai/02/2013(H7N9)) (7)
	Severe acute respiratory syndrome coronavirus 2 (7)
	Influenza A virus (A/California/04/2009(H1N1)) (5)
	Oryctolagus cuniculus (4)
	Streptococcus mutans (4)
	Influenza A virus (A/Japan/305+/1957(H2N2)) (3)
	Human parainfluenza 3 virus (strain NIH 47885) (2)

More...

Taxonomy

	Eukaryota (80)
	Riboviria (35)
	Bacteria (9)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (101)
	ELECTRON MICROSCOPY (11)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (113)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (34)
	2.0 - 2.5 (29)
	2.5 - 3.0 (29)
	3.0 - 3.5 (10)
	3.5 - 4.0 (5)
	4.0 - 4.5 (1)

Release Date

	1995 - 1999 (2)
	2005 - 2009 (7)
	2010 - 2014 (44)
	2015 - 2019 (24)
	2020 - 2024 (34)
	2025 - 2029 (2)

Enzyme Classification Name

	Hydrolases (29)
	Transferases (14)
	Lyases (4)
	Oxidoreductases (4)

Membrane Protein Annotation

	PDBTM (4)
	MemProtMD (1)

Symmetry Type

	Asymmetric (67)
	Cyclic (42)
	Dihedral (10)

SCOP Classification

	All beta proteins (32)
	Artifacts (38)
	Alpha and beta proteins (a/b) (15)
	Coiled coil proteins (23)
	All alpha proteins (18)
	Alpha and beta proteins (a+b) (17)

AllSelected

1 to 25 of 113 Structures

Page 1 of 5

Sort by

Explore in 3D

1CKI \| pdb_00001cki	Download File View File

RECOMBINANT CASEIN KINASE I DELTA TRUNCATION MUTANT CONTAINING RESIDUES 1-317

Longenecker, K.L., Roach, P.J., Hurley, T.D.

(1996) J Mol Biology 257: 618-631

Released	1995-12-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Rattus norvegicus
Macromolecule	CASEIN KINASE I DELTA (protein)

Explore in 3D

1CKJ \| pdb_00001ckj	Download File View File

CASEIN KINASE I DELTA TRUNCATION MUTANT CONTAINING RESIDUES 1-317 COMPLEX WITH BOUND TUNGSTATE

Longenecker, K.L., Roach, P.J., Hurley, T.D.

(1996) J Mol Biology 257: 618-631

Released	1995-12-07
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Rattus norvegicus
Macromolecule	RECOMBINANT CASEIN KINASE I DELTA (protein)
Unique Ligands	WO4

Explore in 3D

2G0I \| pdb_00002g0i	Download File View File

Crystal structure of SMU.848 from Streptococcus mutans

Hou, H.-F., Gao, Z.-Q., Li, L.-F., Liang, Y.-H., Su, X.-D., Dong, Y.-H.

To be published

Released	2006-08-08
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Streptococcus mutans
Macromolecule	hypothetical protein SMU.848 (protein)
Unique Ligands	CA, PEG

Explore in 3D

2G0J \| pdb_00002g0j	Download File View File

Crystal structure of SMU.848 from Streptococcus mutans

Hou, H.-F., Gao, Z.-Q., Li, L.-F., Liang, Y.-H., Su, X.-D., Dong, Y.-H.

To be published

Released	2006-08-08
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Streptococcus mutans
Macromolecule	hypothetical protein SMU.848 (protein)

Explore in 3D

2HCU \| pdb_00002hcu	Download File View File

Crystal Structure Of Smu.1381 (or LeuD) from Streptococcus Mutans

Gao, Z.Q., Hou, H.F., Li, L.F., Liang, Y.H., Su, X.D., Dong, Y.H.

To be published

Released	2006-07-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Streptococcus mutans
Macromolecule	3-isopropylmalate dehydratase small subunit (protein)
Unique Ligands	SO4

Explore in 3D

2MKZ \| pdb_00002mkz	Download File View File

solution structure of a protein C-terminal domain

Feng, Y., Jiao, L.

(2014) Protein Cell 5: 616-630

Released	2014-12-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Proteasomal ubiquitin receptor ADRM1 (protein)

Explore in 3D

2ONC \| pdb_00002onc	Download File View File

Crystal structure of human DPP-4

Feng, J., Zhang, Z., Wallace, M.B., Stafford, J.A., Kaldor, S.W., Kassel, D.B., Navre, M., Shi, L., Skene, R.J., Asakawa, T., Takeuchi, K., Xu, R., Webb, D.R., Gwaltney, S.L.

(2007) J Med Chem 50: 2297-2300

Released	2008-03-04
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	NAG, SY1
Unique branched monosaccharides	NAG

Explore in 3D

3CCB \| pdb_00003ccb	Download File View File

Crystal Structure of Human DPP4 in complex with a benzimidazole derivative

Wallace, M.B., Skene, R.J.

(2008) Bioorg Med Chem Lett 18: 2362-2367

Released	2008-10-21
Method	X-RAY DIFFRACTION 2.49 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	B2Y, NAG
Unique branched monosaccharides	NAG

Explore in 3D

3CCC \| pdb_00003ccc	Download File View File

Crystal Structure of Human DPP4 in complex with a benzimidazole derivative

Wallace, M.B., Skene, R.J.

(2008) Bioorg Med Chem Lett 18: 2362-2367

Released	2008-10-21
Method	X-RAY DIFFRACTION 2.71 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	7AC, NAG
Unique branched monosaccharides	NAG

Explore in 3D

3DEZ \| pdb_00003dez	Download File View File

Crystal structure of Orotate phosphoribosyltransferase from Streptococcus mutans

Liu, C.P., Gao, Z.Q., Hou, H.F., Li, L.F., Su, X.D., Dong, Y.H.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 498-502

Released	2009-06-16
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Streptococcus mutans
Macromolecule	Orotate phosphoribosyltransferase (protein)
Unique Ligands	SO4

Explore in 3D

3G0B \| pdb_00003g0b	Download File View File

Crystal structure of dipeptidyl peptidase IV in complex with TAK-322

Zhang, Z., Wallace, M.B., Feng, J., Stafford, J.A., Kaldor, S.W., Shi, L., Skene, R.J., Aertgeerts, K., Lee, B., Jennings, A., Xu, R., Kassel, D., Webb, D.R., Gwaltney, S.L.

(2011) J Med Chem 54: 510-524

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	NAG, T22
Unique branched monosaccharides	NAG

Explore in 3D

3G0C \| pdb_00003g0c	Download File View File

Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 1

Zhang, Z., Wallace, M.B., Feng, J., Stafford, J.A., Kaldor, S.W., Shi, L., Skene, R.J., Aertgeerts, K., Lee, B., Jennings, A., Xu, R., Kassel, D., Webb, D.R., Gwaltney, S.L.

(2011) J Med Chem 54: 510-524

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.69 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	NAG, RUF
Unique branched monosaccharides	NAG

Explore in 3D

3G0D \| pdb_00003g0d	Download File View File

Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 2

Zhang, Z., Wallace, M.B., Feng, J., Stafford, J.A., Kaldor, S.W., Shi, L., Skene, R.J., Aertgeerts, K., Lee, B., Jennings, A., Xu, R., Kassel, D., Webb, D.R., Gwaltney, S.L.

(2011) J Med Chem 54: 510-524

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.39 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	NAG, XIH
Unique branched monosaccharides	NAG

Explore in 3D

3G0G \| pdb_00003g0g	Download File View File

Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinone inhibitor 3

Zhang, Z., Wallace, M.B., Feng, J., Stafford, J.A., Kaldor, S.W., Shi, L., Skene, R.J., Aertgeerts, K., Lee, B., Jennings, A., Xu, R., Kassel, D., Webb, D.R., Gwaltney, S.L.

(2011) J Med Chem 54: 510-524

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase 4 (protein)
Unique Ligands	NAG, RUM
Unique branched monosaccharides	NAG

Explore in 3D

3KU3 \| pdb_00003ku3	Download File View File

Crystal structure of a H2N2 influenza virus hemagglutinin, avian like

Xu, R., Wilson, I.A.

(2010) J Virol 84: 1715-1721

Released	2010-01-19
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Influenza A virus (A/Japan/305/1957(H2N2))
Macromolecule	Hemagglutinin HA1 chain (protein) Hemagglutinin HA2 chain (protein)
Unique Ligands	EDO, NAG, PEG
Unique branched monosaccharides	NAG

Explore in 3D

3KU5 \| pdb_00003ku5	Download File View File

Crystal structure of a H2N2 influenza virus hemagglutinin, human like

Xu, R., Wilson, I.A.

(2010) J Virol 84: 1715-1721

Released	2010-01-19
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Influenza A virus (A/Japan/305/1957(H2N2))
Macromolecule	Hemagglutinin HA1 chain (protein) Hemagglutinin HA2 chain (protein)
Unique Ligands	EDO, NAG, PEG
Unique branched monosaccharides	NAG

Explore in 3D

3KU6 \| pdb_00003ku6	Download File View File

Crystal structure of a H2N2 influenza virus hemagglutinin, 226L/228G

Xu, R., Wilson, I.A.

(2010) J Virol 84: 1715-1721

Released	2010-01-19
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Influenza A virus (A/Japan/305/1957(H2N2))
Macromolecule	Hemagglutinin HA1 chain (protein) Hemagglutinin HA2 chain (protein)
Unique Ligands	EDO, NAG, PEG
Unique branched monosaccharides	NAG

Explore in 3D

3LZF \| pdb_00003lzf	Download File View File

Crystal Structure of Fab 2D1 in Complex with the 1918 Influenza Virus Hemagglutinin

Ekiert, D.C., Wilson, I.A.

(2010) Science 328: 357-360

Released	2010-04-07
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens Influenza A virus (A/South Carolina/1/1918(H1N1))
Macromolecule	2D1 Fab, Heavy Chain (protein) 2D1 Fab, Light Chain (protein) Hemagglutinin, HA1 Subunit (protein) Hemagglutinin, HA2 Subunit (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

Explore in 3D

3LZG \| pdb_00003lzg	Download File View File

Crystal structure of a 2009 H1N1 influenza virus hemagglutinin

Xu, R., Wilson, I.A.

(2010) Science 328: 357-360

Released	2010-04-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Influenza A virus (A/California/04/2009(H1N1))
Macromolecule	Hemagglutinin, HA1 SUBUNIT (protein) Hemagglutinin, HA2 SUBUNIT (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

Explore in 3D

3OCB \| pdb_00003ocb	Download File View File

Akt1 kinase domain with pyrrolopyrimidine inhibitor

Morales, T.H., Vigers, G.P.A., Brandhuber, B.J.

(2010) Bioorg Med Chem Lett 20: 5607-5612

Released	2010-09-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	GSK 3 beta peptide (protein) v-akt murine thymoma viral oncogene homolog 1 (AKT1) (protein)
Unique Ligands	XM1

Explore in 3D

3OW3 \| pdb_00003ow3	Download File View File

Discovery of dihydrothieno- and dihydrofuropyrimidines as potent pan Akt inhibitors

Dizon, F., Wu, W., Vigers, G.P.A., Brandhuber, B.J.

(2010) Bioorg Med Chem Lett 20: 7037-7041

Released	2010-11-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mus musculus
Macromolecule	cAMP-dependent protein kinase catalytic subunit alpha (protein) cAMP-dependent protein kinase inhibitor alpha (protein)
Unique Ligands	SMY

Explore in 3D

3OW4 \| pdb_00003ow4	Download File View File

Discovery of dihydrothieno- and dihydrofuropyrimidines as potent pan Akt inhibitors

Dizon, F., Wu, W., Vigers, G.P.A., Brandhuber, B.J.

(2010) Bioorg Med Chem Lett 20: 7037-7041

Released	2010-11-10
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	GSK 3 beta peptide (protein) RAC-alpha serine/threonine-protein kinase (protein)
Unique Ligands	SMY

Explore in 3D

3PLZ \| pdb_00003plz	Download File View File

Human LRH1 LBD bound to GR470

Williams, S.P., Xu, R., Zuercher, W.J.

(2011) J Med Chem 54: 2266-2281

Released	2011-03-30
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	FTZ-F1 related protein (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	470, EDO

Explore in 3D

3QKK \| pdb_00003qkk	Download File View File

Spirochromane Akt Inhibitors

Kallan, N.C., Spencer, K.L., Blake, J.F., Xu, R., Heizer, J., Bencsik, J.R., Mitchell, I.S., Gloor, S.L., Martinson, M., Risom, T., Gross, S.D., Morales, T., Vigers, G.P.A., Brandhuber, B.J., Skelton, N.J.

(2011) Bioorg Med Chem Lett 21: 2410-2414

Released	2011-03-30
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Glycogen synthase kinase-3 beta (protein) RAC-alpha serine/threonine-protein kinase (protein)
Unique Ligands	SMH

Explore in 3D

3QKL \| pdb_00003qkl	Download File View File

Spirochromane Akt Inhibitors

(2011) Bioorg Med Chem Lett 21: 2410-2414

Released	2011-03-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Glycogen synthase kinase-3 beta (protein) RAC-alpha serine/threonine-protein kinase (protein)
Unique Ligands	SMR

1 to 25 of 113 Structures

Page 1 of 5

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1CKI | pdb_00001cki

1CKJ | pdb_00001ckj

2G0I | pdb_00002g0i

2G0J | pdb_00002g0j

2HCU | pdb_00002hcu

2MKZ | pdb_00002mkz

2ONC | pdb_00002onc

3CCB | pdb_00003ccb

3CCC | pdb_00003ccc

3DEZ | pdb_00003dez

3G0B | pdb_00003g0b

3G0C | pdb_00003g0c

3G0D | pdb_00003g0d

3G0G | pdb_00003g0g

3KU3 | pdb_00003ku3

3KU5 | pdb_00003ku5

3KU6 | pdb_00003ku6

3LZF | pdb_00003lzf

3LZG | pdb_00003lzg

3OCB | pdb_00003ocb

3OW3 | pdb_00003ow3

3OW4 | pdb_00003ow4

3PLZ | pdb_00003plz

3QKK | pdb_00003qkk

3QKL | pdb_00003qkl