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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Michalczyk, E."

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Homo sapiens (13)
	Mus musculus (2)
	Cereibacter sphaeroides (1)
	Human immunodeficiency virus 1 (1)
	Human immunodeficiency virus type 1 (1)
	Vibrio alginolyticus (1)

Taxonomy

	Eukaryota (15)
	Bacteria (2)
	Riboviria (1)
	Riboviria (RNA viruses and viroids) (1)

Experimental Method

	X-RAY DIFFRACTION (16)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (18)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (7)
	2.0 - 2.5 (7)
	3.0 - 3.5 (2)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (5)
	2005 - 2009 (11)
	2010 - 2014 (1)

Enzyme Classification Name

	Hydrolases (5)
	Transferases (3)

Membrane Protein Annotation

	MemProtMD (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (16)
	Cyclic (2)

SCOP Classification

	All beta proteins (11)
	All alpha proteins (3)
	Small proteins (4)
	Alpha and beta proteins (a+b) (3)
	Membrane and cell surface proteins and peptides (1)
	Artifacts (1)

AllSelected

1 to 18 of 18 Structures

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1BJM \| pdb_00001bjm	Download File View File

LOC NAKS, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN NAKSO4

Schiffer, M., Huang, D.B.

(1996) Proc Natl Acad Sci U S A 93: 7017-7021

Released	1995-12-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	LOC - LAMBDA 1 TYPE LIGHT-CHAIN DIMER (protein)

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1HVR \| pdb_00001hvr	Download File View File

RATIONAL DESIGN OF POTENT, BIOAVAILABLE, NONPEPTIDE CYCLIC UREAS AS HIV PROTEASE INHIBITORS

Chang, C.-H.

(1994) Science 263: 380-384

Released	1995-01-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 PROTEASE (protein)
Unique Ligands	XK2

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1LVE \| pdb_00001lve	Download File View File

STRUCTURE OF THE VARIABLE DOMAIN OF HUMAN IMMUNOGLOBULIN K-4 LIGHT CHAIN LEN

Schiffer, M., Huang, D.-B., Chang, C.-H.

(1997) Mol Immunol 34: 1291-1301

Released	1998-01-21
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	LEN, A VARIABLE DOMAIN FROM KAPPA-4 TYPE (protein)

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2A3S \| pdb_00002a3s	Download File View File

Solution structure and Dynamics of DNA-Binding Domain of Myocyte Nuclear Factor

Chuang, W.-J., Chang, C.-H., Jeng, W.-Y., Chu, Y.-P.

To be published

Released	2006-06-13
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	Myocyte Nuclear Factor (protein)

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2B52 \| pdb_00002b52	Download File View File

Human cyclin dependent kinase 2 (CDK2) complexed with DPH-042562

Muckelbauer, J.

(2004) Bioorg Med Chem Lett 14: 343-346

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	D42

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2B53 \| pdb_00002b53	Download File View File

Human cyclin dependent kinase 2 (CDK2) complexed with DIN-234325

Muckelbauer, J.

(2001) Bioorg Med Chem Lett 11: 1157-1160

Released	2005-10-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	D23

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2B55 \| pdb_00002b55	Download File View File

Human cyclin dependent kinase 2 (cdk2) complexed with indenopyraxole DIN-101312

Muckelbauer, J.

(2002) J Med Chem 45: 5233-5248

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	D31

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2C6Y \| pdb_00002c6y	Download File View File

Crystal structure of interleukin enhancer-binding factor 1 bound to DNA

Tsai, K.-L., Huang, C.-Y., Chang, C.-H., Sun, Y.-J., Chuang, W.-J., Hsiao, C.-D.

(2006) J Biological Chem 281: 17400

Released	2006-04-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	FORKHEAD BOX PROTEIN K2 (protein) INTERLEUKIN 2 PROMOTOR (nucleic acid)
Unique Ligands	MG

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2D2W \| pdb_00002d2w	Download File View File

Solution structure and Dynamics of the DNA-Binding Domain of Myocyte Nuclear Factor

Chuang, W.-J., Chang, C.-H., Jeng, W.-Y., Chu, Y.-P.

To be published

Released	2006-09-05
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	Forkhead box protein K1 (protein)

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2P93 \| pdb_00002p93	Download File View File

Factor xa in complex with the inhibitor 5-chloro-N-(2-(4-(2-oxopyridin-1(2H)-yl)benzamido)ethyl)thiophene-2-carboxamide

Chang, C.-H.

(2007) Bioorg Med Chem Lett 17: 4419-4427

Released	2007-07-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Factor Xa (protein)
Unique Ligands	ME1

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2P94 \| pdb_00002p94	Download File View File

Factor xa in complex with the inhibitor 3-chloro-N-((1R,2S)-2-(4-(2-oxopyridin-1(2H)-yl)benzamido)cyclohexyl)-1H-indole-6-carboxamide

Chang, C.-H.

(2007) Bioorg Med Chem Lett 17: 4419-4427

Released	2007-07-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Factor Xa (protein)
Unique Ligands	ME4

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2P95 \| pdb_00002p95	Download File View File

Factor xa in complex with the inhibitor 5-chloro-N-((1R,2S)-2-(4-(2-oxopyridin-1(2H)-YL)benzamido) cyclopentyl)thiophene-2-carboxamide

Chang, C.-H.

(2007) Bioorg Med Chem Lett 17: 4419-4427

Released	2007-07-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Factor Xa (protein)
Unique Ligands	ME5

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2RCR \| pdb_00002rcr	Download File View File

STRUCTURE OF THE MEMBRANE-BOUND PROTEIN PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES

Chang, C.-H., Norris, J., Schiffer, M.

(1991) Biochemistry 30: 5352-5360

Released	1993-07-15
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Cereibacter sphaeroides
Macromolecule	PHOTOSYNTHETIC REACTION CENTER (H SUBUNIT) (protein) PHOTOSYNTHETIC REACTION CENTER (L SUBUNIT) (protein) PHOTOSYNTHETIC REACTION CENTER (M SUBUNIT) (protein)
Unique Ligands	BCL, BPH, FE, UQ

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3BJL \| pdb_00003bjl	Download File View File

LOC, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN AMMONIUM SULFATE

Schiffer, M., Huang, D.B.

(1996) Proc Natl Acad Sci U S A 93: 7017-7021

Released	1995-12-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	LOC - LAMBDA 1 TYPE LIGHT-CHAIN DIMER (protein)

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3CEN \| pdb_00003cen	Download File View File

Factor XA in complex with the inhibitor N-(2-(((5-chloro-2-pyridinyl) amino)sulfonyl)phenyl)-4-(2-oxo-1(2H)-pyridinyl)benzamide

Chang, C.-H.

(2008) Bioorg Med Chem Lett 18: 2845-2849

Released	2008-05-20
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	COAGULATION FACTOR X, HEAVY CHAIN (protein) COAGULATION FACTOR X, LIGHT CHAIN (protein)
Unique Ligands	FXA

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3GIV \| pdb_00003giv	Download File View File

Antigen processing influences HIV-specific cytotoxic T lymphocyte immunodominance

Stewart-Jones, G., Iversen, A.K.N., Jones, E.Y.

(2009) Nat Immunol 10: 636-646

Released	2009-06-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Human immunodeficiency virus type 1
Macromolecule	Beta-2-microglobulin (protein) HIV-1 peptide (protein) HLA class I histocompatibility antigen, A-2 alpha chain (protein)

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3MRU \| pdb_00003mru	Download File View File

Crystal Structure of Aminoacylhistidine Dipeptidase from Vibrio alginolyticus

Chang, C.-Y., Hsieh, Y.-C., Wu, T.-K., Chen, C.-J.

(2010) J Biological Chem 285: 39500-39510

Released	2010-09-01
Method	X-RAY DIFFRACTION 3 Å
Organisms	Vibrio alginolyticus
Macromolecule	Aminoacyl-histidine dipeptidase (protein)
Unique Ligands	ZN

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4BJL \| pdb_00004bjl	Download File View File

LOCW, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN DISTILLED WATER

Schiffer, M., Huang, D.B.

(1996) Proc Natl Acad Sci U S A 93: 7017-7021

Released	1995-12-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	LOC - LAMBDA 1 TYPE LIGHT-CHAIN DIMER (protein)

1 to 18 of 18 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1BJM | pdb_00001bjm

LOC NAKS, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN NAKSO4

1HVR | pdb_00001hvr

RATIONAL DESIGN OF POTENT, BIOAVAILABLE, NONPEPTIDE CYCLIC UREAS AS HIV PROTEASE INHIBITORS

1LVE | pdb_00001lve

STRUCTURE OF THE VARIABLE DOMAIN OF HUMAN IMMUNOGLOBULIN K-4 LIGHT CHAIN LEN

2A3S | pdb_00002a3s

Solution structure and Dynamics of DNA-Binding Domain of Myocyte Nuclear Factor

2B52 | pdb_00002b52

Human cyclin dependent kinase 2 (CDK2) complexed with DPH-042562

2B53 | pdb_00002b53

Human cyclin dependent kinase 2 (CDK2) complexed with DIN-234325

2B55 | pdb_00002b55

Human cyclin dependent kinase 2 (cdk2) complexed with indenopyraxole DIN-101312

2C6Y | pdb_00002c6y

Crystal structure of interleukin enhancer-binding factor 1 bound to DNA

2D2W | pdb_00002d2w

Solution structure and Dynamics of the DNA-Binding Domain of Myocyte Nuclear Factor

2P93 | pdb_00002p93

Factor xa in complex with the inhibitor 5-chloro-N-(2-(4-(2-oxopyridin-1(2H)-yl)benzamido)ethyl)thiophene-2-carboxamide

2P94 | pdb_00002p94

Factor xa in complex with the inhibitor 3-chloro-N-((1R,2S)-2-(4-(2-oxopyridin-1(2H)-yl)benzamido)cyclohexyl)-1H-indole-6-carboxamide

2P95 | pdb_00002p95

Factor xa in complex with the inhibitor 5-chloro-N-((1R,2S)-2-(4-(2-oxopyridin-1(2H)-YL)benzamido) cyclopentyl)thiophene-2-carboxamide

2RCR | pdb_00002rcr

STRUCTURE OF THE MEMBRANE-BOUND PROTEIN PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES

3BJL | pdb_00003bjl

LOC, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN AMMONIUM SULFATE

3CEN | pdb_00003cen

Factor XA in complex with the inhibitor N-(2-(((5-chloro-2-pyridinyl) amino)sulfonyl)phenyl)-4-(2-oxo-1(2H)-pyridinyl)benzamide

3GIV | pdb_00003giv

Antigen processing influences HIV-specific cytotoxic T lymphocyte immunodominance

3MRU | pdb_00003mru

Crystal Structure of Aminoacylhistidine Dipeptidase from Vibrio alginolyticus

4BJL | pdb_00004bjl

LOCW, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN DISTILLED WATER

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1BJM | pdb_00001bjm

1HVR | pdb_00001hvr

1LVE | pdb_00001lve

2A3S | pdb_00002a3s

2B52 | pdb_00002b52

2B53 | pdb_00002b53

2B55 | pdb_00002b55

2C6Y | pdb_00002c6y

2D2W | pdb_00002d2w

2P93 | pdb_00002p93

2P94 | pdb_00002p94

2P95 | pdb_00002p95

2RCR | pdb_00002rcr

3BJL | pdb_00003bjl

3CEN | pdb_00003cen

3GIV | pdb_00003giv

3MRU | pdb_00003mru

4BJL | pdb_00004bjl