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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Meroni, G."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

Homo sapiens (11)

Taxonomy

Eukaryota (11)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	2.5 - 3.0 (3)
	3.0 - 3.5 (8)

Release Date

	2010 - 2014 (5)
	2015 - 2019 (6)

Enzyme Classification Name

Oxidoreductases (11)

Symmetry Type

Asymmetric (11)

SCOP Classification

	All alpha proteins (5)
	Alpha and beta proteins (a+b) (5)
	Alpha and beta proteins (a/b) (5)
	Coiled coil proteins (5)

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1 to 11 of 11 Structures

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Explore in 3D

4UV8 \| pdb_00004uv8	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Benzyl-Tranylcypromine

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D69

Explore in 3D

4UV9 \| pdb_00004uv9	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Ethyl-Tranylcypromine

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D70

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4UVA \| pdb_00004uva	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1R,2S)

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D73

Explore in 3D

4UVB \| pdb_00004uvb	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1S,2R)

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D51

Explore in 3D

4UVC \| pdb_00004uvc	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Phenyl-Tranylcypromine

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D52

Explore in 3D

5LGN \| pdb_00005lgn	Download File View File

Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 19

Mattevi, A., Ciossani, G.

(2017) J Med Chem 60: 1673-1692

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	6W0, FAD

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5LGT \| pdb_00005lgt	Download File View File

Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 15

Mattevi, A., Ciossani, G.

(2017) J Med Chem 60: 1693-1715

Released	2017-02-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	6W3, FAD

Explore in 3D

5LGU \| pdb_00005lgu	Download File View File

Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 34

Mattevi, A., Ciossani, G.

(2017) J Med Chem 60: 1693-1715

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	6W1, FAD

Explore in 3D

5LHG \| pdb_00005lhg	Download File View File

Structure of the KDM1A/CoREST complex with the inhibitor 4-methyl-N-[4-[[4-(1-methylpiperidin-4-yl)oxyphenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide

Cecatiello, V., Pasqualato, S.

(2017) J Med Chem 60: 1693-1715

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.34 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	6X3, FAD, GOL

Explore in 3D

5LHH \| pdb_00005lhh	Download File View File

Structure of the KDM1A/CoREST complex with the inhibitor 4-ethyl-N-[3-(methoxymethyl)-2-[[4-[[(3R)-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide

Cecatiello, V., Pasqualato, S.

(2017) J Med Chem 60: 1693-1715

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	6X0, FAD, GOL

Explore in 3D

5LHI \| pdb_00005lhi	Download File View File

Structure of the KDM1A/CoREST complex with the inhibitor N-[3-(ethoxymethyl)-2-[[4-[[(3R)-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]-4-methylthieno[3,2-b]pyrrole-5-carboxamide

Cecatiello, V., Pasqualato, S.

(2017) J Med Chem 60: 1693-1715

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST corepressor 1 (protein)
Unique Ligands	6X5, FAD, GOL

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4UV8 | pdb_00004uv8

LSD1(KDM1A)-CoREST in complex with 1-Benzyl-Tranylcypromine

4UV9 | pdb_00004uv9

LSD1(KDM1A)-CoREST in complex with 1-Ethyl-Tranylcypromine

4UVA | pdb_00004uva

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1R,2S)

4UVB | pdb_00004uvb

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1S,2R)

4UVC | pdb_00004uvc

LSD1(KDM1A)-CoREST in complex with 1-Phenyl-Tranylcypromine

5LGN | pdb_00005lgn

Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 19

5LGT | pdb_00005lgt

Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 15

5LGU | pdb_00005lgu

Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 34

5LHG | pdb_00005lhg

Structure of the KDM1A/CoREST complex with the inhibitor 4-methyl-N-[4-[[4-(1-methylpiperidin-4-yl)oxyphenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide

5LHH | pdb_00005lhh

Structure of the KDM1A/CoREST complex with the inhibitor 4-ethyl-N-[3-(methoxymethyl)-2-[[4-[[(3R)-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide

5LHI | pdb_00005lhi

Structure of the KDM1A/CoREST complex with the inhibitor N-[3-(ethoxymethyl)-2-[[4-[[(3R)-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]-4-methylthieno[3,2-b]pyrrole-5-carboxamide

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4UV8 | pdb_00004uv8

4UV9 | pdb_00004uv9

4UVA | pdb_00004uva

4UVB | pdb_00004uvb

4UVC | pdb_00004uvc

5LGN | pdb_00005lgn

5LGT | pdb_00005lgt

5LGU | pdb_00005lgu

5LHG | pdb_00005lhg

5LHH | pdb_00005lhh

5LHI | pdb_00005lhi