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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Ilangovan, A."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Escherichia coli (4)
	Bacillus subtilis (2)
	Pseudomonas aeruginosa UCBPP-PA14 (2)
	Salmonella enterica (2)
	Bacillus subtilis subsp. subtilis str. 168 (1)
	DNA molecule (1)
	Escherichia coli O127:H6 str. E2348/69 (1)
	Pseudomonas aeruginosa (1)
	Salmonella enterica subsp. enterica serovar Typhi (1)
	Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 (1)

Taxonomy

	Bacteria (14)
	unclassified sequences (1)

Experimental Method

	ELECTRON MICROSCOPY (9)
	X-RAY DIFFRACTION (5)

Polymer Entity Type

	Protein (14)
	DNA (2)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (1)
	2.5 - 3.0 (3)
	3.0 - 3.5 (4)
	3.5 - 4.0 (2)
	> 4.5 (3)

Release Date

	2010 - 2014 (4)
	2015 - 2019 (4)
	2020 - 2024 (6)

Enzyme Classification Name

	Hydrolases (4)
	Isomerases (1)

Membrane Protein Annotation

	mpstruc (2)
	OPM (1)
	PDBTM (1)

Symmetry Type

	Cyclic (7)
	Helical (4)
	Asymmetric (3)
	Dihedral (1)

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1 to 14 of 14 Structures

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4JVC \| pdb_00004jvc	Download File View File

Crystal structure of PqsR co-inducer binding domain

Ilangovan, A., Emsley, J., Williams, P.

(2013) PLoS Pathog 9: e1003508-e1003508

Released	2013-08-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Transcriptional regulator MvfR (protein)
Unique Ligands	MRD

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4JVD \| pdb_00004jvd	Download File View File

Crystal structure of PqsR coinducer binding domain of Pseudomonas aeruginosa with ligand NHQ

Ilangovan, A., Emsley, J., Williams, P.

(2013) PLoS Pathog 9: e1003508-e1003508

Released	2013-08-07
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Pseudomonas aeruginosa UCBPP-PA14
Macromolecule	Transcriptional regulator MvfR (protein)
Unique Ligands	NNQ

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4JVI \| pdb_00004jvi	Download File View File

Crystal structure of PqsR co-inducer binding domain of Pseudomonas aeruginosa with inhibitor 3NH2-7Cl-C9QZN

Ilangovan, A., Williams, P., Emsley, J.

(2013) PLoS Pathog 9: e1003508-e1003508

Released	2013-08-07
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Transcriptional regulator MvfR (protein)
Unique Ligands	QZN

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4L0J \| pdb_00004l0j	Download File View File

Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems

Redzej, A., Ilangovan, A., Lang, S., Gruber, C.J., Topf, M., Zangger, K., Zechner, E.L., Waksman, G.

(2013) Mol Microbiol 89: 324-333

Released	2013-06-19
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Escherichia coli
Macromolecule	DNA helicase I (protein)
Unique Ligands	MG, SO4

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5LEG \| pdb_00005leg	Download File View File

Structure of the bacterial sex F pilus (pED208)

Costa, T.R.D., Ilangovan, I., Ukleja, M., Redzej, A., Santini, J.M., Smith, T.K., Egelman, E.H., Waksman, G.

(2016) Cell 166: 1436-1444.e10

Released	2016-09-28
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Pilin (protein)
Unique Ligands	LHG

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5LER \| pdb_00005ler	Download File View File

Structure of the bacterial sex F pilus (13.2 Angstrom rise)

Costa, T.R.D., Ilangovan, I., Ukleja, M., Redzej, A., Santini, J.M., Smith, T.K., Egelman, E.H., Waksman, G.

(2016) Cell 166: 1436-1444.e10

Released	2016-11-02
Method	ELECTRON MICROSCOPY 5 Å
Organisms	Escherichia coli
Macromolecule	Pilin (protein)
Unique Ligands	6V6

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5LFB \| pdb_00005lfb	Download File View File

Structure of the bacterial sex F pilus (12.5 Angstrom rise)

Costa, T.R.D., Ilangovan, I., Ukleja, M., Redzej, A., Santini, J.M., Smith, T.K., Egelman, E.H., Waksman, G.

(2016) Cell 166: 1436-1444.e10

Released	2016-11-02
Method	ELECTRON MICROSCOPY 5 Å
Organisms	Escherichia coli
Macromolecule	Pilin (protein)
Unique Ligands	6V6

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5N8O \| pdb_00005n8o	Download File View File

Cryo EM structure of the conjugative relaxase TraI of the F/R1 plasmid system

Ilangovan, A., Zanetti, G., Waksman, G.

(2017) Cell 169: 708-721.e12

Released	2017-05-03
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Escherichia coli
Macromolecule	DNA helicase I (protein) DNA (5'-D(PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT)-3') (nucleic acid)

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7KHW \| pdb_00007khw	Download File View File

Cryo-EM structure of enteropathogenic Escherichia coli type III secretion system EspA filament

Zheng, W., Ilangovan, A., Costa, T.R.D., Egelman, E.H.

(2021) Proc Natl Acad Sci U S A 118:

Released	2020-12-23
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Escherichia coli O127:H6 str. E2348/69
Macromolecule	Translocon EspA (protein)

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7OKN \| pdb_00007okn	Download File View File

Structure of the outer-membrane core complex (inner ring) from a conjugative type IV secretion system

Amin, H., Ilangovan, A., Costa, T.R.D.

(2021) Nat Commun 12: 6834-6834

Released	2021-12-01
Method	ELECTRON MICROSCOPY 3.34 Å
Organisms	Salmonella enterica
Macromolecule	TraB (protein) Type IV conjugative transfer system lipoprotein TraV (protein)

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7OKO \| pdb_00007oko	Download File View File

Structure of the outer-membrane core complex (outer ring) from a conjugative type IV secretion system

Amin, H., Ilangovan, A., Costa, T.R.D.

(2021) Nat Commun 12: 6834-6834

Released	2021-12-08
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Salmonella enterica Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6
Macromolecule	TraB (protein) Type IV conjugative transfer system lipoprotein TraV (protein) Type-F conjugative transfer system secretin TraK (protein)

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8BTG \| pdb_00008btg	Download File View File

Cryo-EM structure of the bacterial replication origin opening basal unwinding system

Pelliciari, S., Bodet-Lefevre, S., Murray, H., Ilangovan, A.

(2023) Nat Commun 14: 8339

Released	2024-02-14
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Bacillus subtilis DNA molecule
Macromolecule	Chromosomal replication initiator protein DnaA (protein) DNA (41-MER) (nucleic acid) DNA (5'-D(PAPCPTPTPAPTPCPCPAPCPAPAPAPTPCPCPAPCPAPGPGPCPCPC)-3') (nucleic acid)
Unique Ligands	ATP, MG

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8BV3 \| pdb_00008bv3	Download File View File

Bacillus subtilis DnaA domain III structure

Pintar, S., Hubbard, J.A.

(2023) Nat Commun 14: 8339-8339

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Bacillus subtilis
Macromolecule	Chromosomal replication initiator protein DnaA (protein)
Unique Ligands	ANP, K, MG

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8OJJ \| pdb_00008ojj	Download File View File

Cryo-EM structure of the DnaD-NTD tetramer

Winterhalter, C., Pelliciari, S., Cronin, N., Costa, T.R.D., Murray, H., Ilangovan, A.

(2023) Nucleic Acids Res 51: 4322-4340

Released	2023-05-17
Method	ELECTRON MICROSCOPY 5.47 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	DNA replication protein DnaD (protein)

1 to 14 of 14 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4JVC | pdb_00004jvc

Crystal structure of PqsR co-inducer binding domain

4JVD | pdb_00004jvd

Crystal structure of PqsR coinducer binding domain of Pseudomonas aeruginosa with ligand NHQ

4JVI | pdb_00004jvi

Crystal structure of PqsR co-inducer binding domain of Pseudomonas aeruginosa with inhibitor 3NH2-7Cl-C9QZN

4L0J | pdb_00004l0j

Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems

5LEG | pdb_00005leg

Structure of the bacterial sex F pilus (pED208)

5LER | pdb_00005ler

Structure of the bacterial sex F pilus (13.2 Angstrom rise)

5LFB | pdb_00005lfb

Structure of the bacterial sex F pilus (12.5 Angstrom rise)

5N8O | pdb_00005n8o

Cryo EM structure of the conjugative relaxase TraI of the F/R1 plasmid system

7KHW | pdb_00007khw

Cryo-EM structure of enteropathogenic Escherichia coli type III secretion system EspA filament

7OKN | pdb_00007okn

Structure of the outer-membrane core complex (inner ring) from a conjugative type IV secretion system

7OKO | pdb_00007oko

Structure of the outer-membrane core complex (outer ring) from a conjugative type IV secretion system

8BTG | pdb_00008btg

Cryo-EM structure of the bacterial replication origin opening basal unwinding system

8BV3 | pdb_00008bv3

Bacillus subtilis DnaA domain III structure

8OJJ | pdb_00008ojj

Cryo-EM structure of the DnaD-NTD tetramer

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

4JVC | pdb_00004jvc

4JVD | pdb_00004jvd

4JVI | pdb_00004jvi

4L0J | pdb_00004l0j

5LEG | pdb_00005leg

5LER | pdb_00005ler

5LFB | pdb_00005lfb

5N8O | pdb_00005n8o

7KHW | pdb_00007khw

7OKN | pdb_00007okn

7OKO | pdb_00007oko

8BTG | pdb_00008btg

8BV3 | pdb_00008bv3

8OJJ | pdb_00008ojj