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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Harvey, A."

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Search Summary

This query matches 54 Structures.

Refinements

Structure Determination Methodology

experimental (54)

Scientific Name of Source Organism

	Homo sapiens (35)
	Moorella thermoacetica ATCC 39073 (8)
	Physeter macrocephalus (7)
	Amphitrite ornata (3)
	Moorella thermoacetica (1)

Taxonomy

	Eukaryota (45)
	Bacteria (9)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (54)

Polymer Entity Type

Protein (54)

Refinement Resolution (Å)

	1.0 - 1.5 (11)
	1.5 - 2.0 (16)
	2.0 - 2.5 (11)
	2.5 - 3.0 (13)
	3.0 - 3.5 (3)

Release Date

	2005 - 2009 (16)
	2010 - 2014 (38)

Enzyme Classification Name

	Transferases (20)
	Oxidoreductases (7)
	Ligases (9)
	Lyases (8)

Symmetry Type

	Cyclic (35)
	Asymmetric (21)
	Dihedral (8)

SCOP Classification

	Alpha and beta proteins (a+b) (26)
	Alpha and beta proteins (a/b) (17)
	All alpha proteins (11)
	All beta proteins (6)
	Artifacts (1)

AllSelected

1 to 25 of 54 Structures

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1YPV \| pdb_00001ypv	Download File View File

Structure of human thymidylate synthase at low salt conditions

Lovelace, L.L., Minor, W., Lebioda, L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 622-627

Released	2005-04-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	PO4

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2AKM \| pdb_00002akm	Download File View File

Fluoride Inhibition of Enolase: Crystal Structure of the Inhibitory Complex

Qin, J., Chai, G., Brewer, J.M., Lovelace, L.L.

(2006) Biochemistry 45: 793-800

Released	2006-03-21
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Homo sapiens
Macromolecule	Gamma enolase (protein)
Unique Ligands	MG, PO4, TRS

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2AKZ \| pdb_00002akz	Download File View File

Fluoride Inhibition of Enolase: Crystal Structure of the Inhibitory Complex

Qin, J., Chai, G., Brewer, J.M., Lovelace, L.L.

(2006) Biochemistry 45: 793-800

Released	2006-03-21
Method	X-RAY DIFFRACTION 1.36 Å
Organisms	Homo sapiens
Macromolecule	Gamma enolase (protein)
Unique Ligands	F, MG, PO4, TRS

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2EVK \| pdb_00002evk	Download File View File

The Structures of Thiolate- and Carboxylate-Ligated Ferric H93G Myoglobin: Models for Cytochrome P450 and for Oxyanion-Bound Heme Proteins

Qin, J., Perera, R., Lovelace, L.L., Dawson, J.H., Lebioda, L.

(2006) Biochemistry 45: 3170-3177

Released	2006-04-18
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Physeter macrocephalus
Macromolecule	Myoglobin (protein)
Unique Ligands	ACY, HEM

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2EVP \| pdb_00002evp	Download File View File

The Structures of Thiolate- and Carboxylate-Ligated Ferric H93G Myoglobin: Models for Cytochrome P450 and for Oxyanion-Bound Heme Proteins

Qin, J., Perera, R., Lovelace, L.L., Dawson, J.H., Lebioda, L.

(2006) Biochemistry 45: 3170-3177

Released	2006-03-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Physeter macrocephalus
Macromolecule	Myoglobin (protein)
Unique Ligands	BME, HEM

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2ONB \| pdb_00002onb	Download File View File

Human Thymidylate Synthase at low salt conditions with PDPA bound

Lovelace, L.L., Gibson, L.M., Lebioda, L.

(2007) Biochemistry 46: 2823-2830

Released	2007-04-10
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthetase (protein)
Unique Ligands	7PA, EDO, SO4

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2OVA \| pdb_00002ova	Download File View File

X-ray structure of Human Complement Protein C8gamma Y83W Mutant

Chiswell, B., Lovelace, L.L., Brannen, C., Ortlund, E.A., Lebioda, L., Sodetz, J.M.

(2007) Biochim Biophys Acta 1774: 637-644

Released	2007-05-22
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Complement component 8, gamma polypeptide (protein)

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2OVD \| pdb_00002ovd	Download File View File

Crystal Structure of Human Complement Protein C8gamma with Laurate

Chiswell, B., Lovelace, L.L., Brannen, C., Ortlund, E.A., Lebioda, L., Sodetz, J.M.

(2007) Biochim Biophys Acta 1774: 637-644

Released	2007-05-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Complement component 8, gamma polypeptide (protein)
Unique Ligands	DAO

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2OVE \| pdb_00002ove	Download File View File

Crystal Structure of Recombinant Human Complement Protein C8gamma

Chiswell, B., Lovelace, L.L., Brannen, C., Ortlund, E.A., Lebioda, L., Sodetz, J.M.

(2007) Biochim Biophys Acta 1774: 637-644

Released	2007-05-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Complement component 8, gamma polypeptide (protein)

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2QOS \| pdb_00002qos	Download File View File

Crystal structure of complement protein C8 in complex with a peptide containing the C8 binding site on C8

Lovelace, L.L., Chiswell, B., Slade, D.J., Sodetz, J.M., Lebioda, L.

(2008) Mol Immunol 45: 750-756

Released	2007-10-16
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Homo sapiens
Macromolecule	Complement component 8, gamma polypeptide (protein) Complement component C8 alpha chain (protein)

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2R8U \| pdb_00002r8u	Download File View File

Structure of fragment of human end-binding protein 1 (EB1) containing the N-terminal domain at 1.35 A resolution

Huang, X., Lovelace, L.L., Smith, D., Lebioda, L.

To be published

Released	2008-09-23
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens
Macromolecule	Microtubule-associated protein RP/EB family member 1 (protein)
Unique Ligands	MOO

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2RD7 \| pdb_00002rd7	Download File View File

Human Complement Membrane Attack Proteins Share a Common Fold with Bacterial Cytolysins

Slade, D.J., Lovelace, L.L., Chruszcz, M., Minor, W., Lebioda, L., Sodetz, J.M.

(2011) J Biological Chem 286: 17585-17592

Released	2008-05-27
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	Complement component C8 alpha chain (protein) Complement component C8 gamma chain (protein)
Unique Ligands	CL

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2RD8 \| pdb_00002rd8	Download File View File

Human Thymidylate Synthase Stabilized in Active Conformation by R163K Mutation: Asymmetry and Reactivity of Cys195

Gibson, L.M., Lovelace, L.L., Lebioda, L.

(2008) Biochemistry 47: 4636-4643

Released	2008-05-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	BME, PO4

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2RDA \| pdb_00002rda	Download File View File

Human Thymidylate Synthase Stabilized in Active Conformation by R163K Mutation: Asymmetry and Reactivity of Cys195

Gibson, L.M., Lovelace, L.L., Lebioda, L.

(2008) Biochemistry 47: 4636-4643

Released	2008-06-10
Method	X-RAY DIFFRACTION 2.67 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	BME, PO4

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3EAW \| pdb_00003eaw	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Pena, M.M., Berger, F.G., Berger, S.H.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	EDO, SO4

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3EBU \| pdb_00003ebu	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Pena, M.M., Berger, F.G., Berger, S.H.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	EDO, SO4

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3ED7 \| pdb_00003ed7	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Pena, M.M., Berger, F.G., Berger, S.H.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	SO4

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3EDW \| pdb_00003edw	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Pena, M.M., Berger, F.G., Berger, S.H.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	SO4

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3EF9 \| pdb_00003ef9	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Pena, M.M., Berger, F.G., Berger, S.H.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	SO4

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3EGY \| pdb_00003egy	Download File View File

Crystal Structure of Human Thymidyalte Synthase A191K with Loop 181-197 stabilized in the inactive conformation

Lovelace, L.L., Gibson, L.M., Johnson, S.R., Berger, S.H., Lebioda, L.

(2009) Protein Sci 18: 1628-1636

Released	2009-08-18
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	EDO, SO4

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3EHI \| pdb_00003ehi	Download File View File

Crystal Structure of Human Thymidyalte Synthase M190K with Loop 181-197 stabilized in the inactive conformation

Lovelace, L.L., Gibson, L.M., Johnson, S.R., Berger, S.H., Lebioda, L.

(2009) Protein Sci 18: 1628-1636

Released	2009-08-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	EDO, SO4

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3EJL \| pdb_00003ejl	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Pena, M.M., Berger, F.G., Berger, S.H.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	PO4, UFP

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3GG5 \| pdb_00003gg5	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Lebioda, L.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 2.77 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	PO4, SO4

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3GH0 \| pdb_00003gh0	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Lebioda, L.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	SO4

Explore in 3D

3GH2 \| pdb_00003gh2	Download File View File

Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability

Huang, X., Gibson, L.M., Bell, B.J., Lovelace, L.L., Lebioda, L.

(2010) Biochemistry 49: 2475-2482

Released	2010-03-02
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	SO4

1 to 25 of 54 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1YPV | pdb_00001ypv

2AKM | pdb_00002akm

2AKZ | pdb_00002akz

2EVK | pdb_00002evk

2EVP | pdb_00002evp

2ONB | pdb_00002onb

2OVA | pdb_00002ova

2OVD | pdb_00002ovd

2OVE | pdb_00002ove

2QOS | pdb_00002qos

2R8U | pdb_00002r8u

2RD7 | pdb_00002rd7

2RD8 | pdb_00002rd8

2RDA | pdb_00002rda

3EAW | pdb_00003eaw

3EBU | pdb_00003ebu

3ED7 | pdb_00003ed7

3EDW | pdb_00003edw

3EF9 | pdb_00003ef9

3EGY | pdb_00003egy

3EHI | pdb_00003ehi

3EJL | pdb_00003ejl

3GG5 | pdb_00003gg5

3GH0 | pdb_00003gh0

3GH2 | pdb_00003gh2