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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Chen, Z.J."

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Search Summary

This query matches 25 Structures.

Refinements

Structure Determination Methodology

experimental (25)

Scientific Name of Source Organism

	Homo sapiens (17)
	Gallus gallus (4)
	Equus caballus (2)
	Mus musculus (2)
	Severe acute respiratory syndrome coronavirus 2 (1)
	Tequatrovirus (1)

Taxonomy

	Eukaryota (24)
	Duplodnaviria (1)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (18)
	ELECTRON MICROSCOPY (7)

Polymer Entity Type

	Protein (25)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (10)
	2.5 - 3.0 (4)
	3.0 - 3.5 (2)
	3.5 - 4.0 (1)
	4.0 - 4.5 (3)
	> 4.5 (2)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (14)
	2015 - 2019 (8)
	2020 - 2024 (2)

Enzyme Classification Name

	Transferases (8)
	Oxidoreductases (1)
	Hydrolases (1)

Membrane Protein Annotation

	mpstruc (5)
	OPM (4)
	PDBTM (4)
	MemProtMD (1)

Symmetry Type

	Asymmetric (11)
	Cyclic (12)
	Dihedral (1)
	Helical (1)

SCOP Classification

Alpha and beta proteins (a+b) (8)

AllSelected

1 to 25 of 25 Structures

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2VCY \| pdb_00002vcy	Download File View File

Crystal Structure of 2-Enoyl Thioester Reductase of Human FAS II

Haapalainen, A.M., Pudas, R., Smart, O.S., Wierenga, R.K.

(2008) J Mol Biology 379: 830

Released	2008-06-03
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Homo sapiens
Macromolecule	TRANS-2-ENOYL-COA REDUCTASE (protein)
Unique Ligands	SO4

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3J6C \| pdb_00003j6c	Download File View File

Cryo-EM structure of MAVS CARD filament

Xu, H., He, X., Zheng, H., Huang, L.J., Hou, F., Yu, Z., de la Cruz, M.J., Borkowski, B., Zhang, X., Chen, Z.J., Jiang, Q.-X.

(2014) Elife 3: e01489-e01489

Released	2014-03-05
Method	ELECTRON MICROSCOPY 9.6 Å
Organisms	Homo sapiens
Macromolecule	Mitochondrial antiviral-signaling protein (protein)

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4F9E \| pdb_00004f9e	Download File View File

Cyclic di-GMP Sensing via the Innate Immune Signaling Protein STING

Kabaleeswaran, V., Wu, H.

(2012) Mol Cell 46: 735-745

Released	2012-07-25
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 173 (protein)

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4F9G \| pdb_00004f9g	Download File View File

Crystal structure of STING complex with Cyclic di-GMP.

Kabaleeswaran, V., Wu, H.

(2012) Mol Cell 46: 735-745

Released	2012-07-25
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 173 (protein)
Unique Ligands	C2E

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4JBO \| pdb_00004jbo	Download File View File

Novel Aurora kinase inhibitors reveal mechanisms of HURP in nucleation of centrosomal and kinetochore microtubules

Wu, J.S., Leou, J.S., Peng, Y.H., Hsueh, C.C., Hsieh, H.P., Wu, S.Y.

(2013) Proc Natl Acad Sci U S A 110: E1779-E1787

Released	2013-06-05
Method	X-RAY DIFFRACTION 2.493 Å
Organisms	Homo sapiens
Macromolecule	Aurora kinase A (protein)
Unique Ligands	WPH

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4JBP \| pdb_00004jbp	Download File View File

Novel Aurora kinase inhibitors reveal mechanisms of HURP in nucleation of centrosomal and kinetochore microtubules

Wu, J.S., Leou, J.S., Peng, Y.H., Hsueh, C.C., Hsieh, H.P., Wu, S.Y.

(2013) Proc Natl Acad Sci U S A 110: E1779-E1787

Released	2013-06-05
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	Aurora Kinase A (protein)
Unique Ligands	YPH

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4JBQ \| pdb_00004jbq	Download File View File

Novel Aurora kinase inhibitors reveal mechanisms of HURP in nucleation of centrosomal and kinetochore microtubules

Wu, J.S., Leou, J.S., Peng, Y.H., Hsueh, C.C., Hsieh, H.P., Wu, S.Y.

(2013) Proc Natl Acad Sci U S A 110: E1779-E1787

Released	2013-06-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Aurora Kinase A (protein)
Unique Ligands	VX6

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4KSY \| pdb_00004ksy	Download File View File

Crystal structure of STING in complex with cGAMP

Zhang, X., Chen, Z.J., Zhang, X.W.

(2013) Mol Cell 51: 226-235

Released	2013-06-12
Method	X-RAY DIFFRACTION 1.881 Å
Organisms	Homo sapiens
Macromolecule	Stimulator of interferon genes protein (protein)
Unique Ligands	1SY

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4NQK \| pdb_00004nqk	Download File View File

Structure of an Ubiquitin complex

Peisley, A., Wu, B., Hur, S.

(2014) Nature 509: 110-114

Released	2014-03-05
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Homo sapiens
Macromolecule	Probable ATP-dependent RNA helicase DDX58 (protein) Ubiquitin (protein)

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4O67 \| pdb_00004o67	Download File View File

Human cyclic GMP-AMP synthase (cGAS) in complex with GAMP

Zhang, X., Chen, Z., Zhang, X.W., Chen, Z.J.

(2014) Cell Rep 6: 421-430

Released	2014-02-05
Method	X-RAY DIFFRACTION 2.444 Å
Organisms	Homo sapiens
Macromolecule	Cyclic GMP-AMP synthase (protein)
Unique Ligands	1SY, ZN

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4O68 \| pdb_00004o68	Download File View File

Structure of human cyclic GMP-AMP synthase (cGAS)

Zhang, X., Chen, Z., Zhang, X.W., Chen, Z.J.

(2014) Cell Rep 6: 421-430

Released	2014-02-05
Method	X-RAY DIFFRACTION 2.436 Å
Organisms	Homo sapiens
Macromolecule	Cyclic GMP-AMP synthase (protein)
Unique Ligands	ZN

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4O69 \| pdb_00004o69	Download File View File

Human cyclic GMP-AMP synthase (cGAS) in complex with sulfate ion

Zhang, X., Chen, Z., Zhang, X.W., Chen, Z.J.

(2014) Cell Rep 6: 421-430

Released	2014-02-05
Method	X-RAY DIFFRACTION 2.252 Å
Organisms	Homo sapiens
Macromolecule	Cyclic GMP-AMP synthase (protein)
Unique Ligands	SO4, ZN

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4O6A \| pdb_00004o6a	Download File View File

Mouse cyclic GMP-AMP synthase (cGAS) in complex with DNA

Zhang, X., Chen, Z., Zhang, X.W., Chen, Z.J.

(2014) Cell Rep 6: 421-430

Released	2014-02-05
Method	X-RAY DIFFRACTION 1.859 Å
Organisms	Mus musculus
Macromolecule	Cyclic GMP-AMP synthase (protein) DNA1 (nucleic acid) DNA2 (nucleic acid)
Unique Ligands	ZN

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4O9F \| pdb_00004o9f	Download File View File

crystal structure of horse MAVS card domain mutant R64C

Zhang, X., He, X.

(2014) Elife 3: e01489-e01489

Released	2014-03-12
Method	X-RAY DIFFRACTION 2.348 Å
Organisms	Equus caballus
Macromolecule	mitochondrial antiviral signaling protein (MAVS) (protein)

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4O9L \| pdb_00004o9l	Download File View File

crystal structure of horse MAVS card domain mutant E26R

Zhang, X., He, X.

(2014) Elife 3: e01489-e01489

Released	2014-03-12
Method	X-RAY DIFFRACTION 1.944 Å
Organisms	Equus caballus
Macromolecule	mitochondrial antiviral signaling protein (MAVS) (protein)

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5BQX \| pdb_00005bqx	Download File View File

Crystal structure of human STING in complex with 3'2'-cGAMP

Wu, J., Zhang, X., Chen, Z.J., Chen, C.

(2015) Proc Natl Acad Sci U S A 112: 8947-8952

Released	2015-06-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Stimulator of interferon genes protein (protein)
Unique Ligands	4UR

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6N34 \| pdb_00006n34	Download File View File

Crystal structure of the BTB domain of Human NS1-BP

Zhang, K., Shang, G., Padavannil, A., Fontoura, B., Chook, Y.M.

(2018) Proc Natl Acad Sci U S A 115: E12218-E12227

Released	2018-12-12
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Influenza virus NS1A-binding protein (protein)

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6N3H \| pdb_00006n3h	Download File View File

Crystal structure of Kelch domain of the human NS1 binding protein

Zhang, K., Shang, G., Padavannil, A., Fontoura, B.M.A., Chook, Y.M.

(2018) Proc Natl Acad Sci U S A 115: E12218-E12227

Released	2018-12-12
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Influenza virus NS1A-binding protein (protein)

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6NT5 \| pdb_00006nt5	Download File View File

Cryo-EM structure of full-length human STING in the apo state

Shang, G., Zhang, C., Chen, Z.J., Bai, X., Zhang, X.

(2019) Nature 567: 389-393

Released	2019-03-06
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Homo sapiens
Macromolecule	Stimulator of interferon protein (protein)

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6NT6 \| pdb_00006nt6	Download File View File

Cryo-EM structure of full-length chicken STING in the apo state

Shang, G., Zhang, C., Chen, Z.J., Bai, X., Zhang, X.

(2019) Nature 567: 389-393

Released	2019-03-06
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Gallus gallus
Macromolecule	Stimulator of interferon genes protein (protein)

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6NT7 \| pdb_00006nt7	Download File View File

Cryo-EM structure of full-length chicken STING in the cGAMP-bound dimeric state

Shang, G., Zhang, C., Chen, Z.J., Bai, X., Zhang, X.

(2019) Nature 567: 389-393

Released	2019-03-06
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Gallus gallus
Macromolecule	Stimulator of interferon genes protein (protein)
Unique Ligands	1SY

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6NT8 \| pdb_00006nt8	Download File View File

Cryo-EM structure of full-length chicken STING in the cGAMP-bound tetrameric state

Shang, G., Zhang, C., Chen, Z.J., Bai, X., Zhang, X.

(2019) Nature 567: 389-393

Released	2019-03-06
Method	ELECTRON MICROSCOPY 6.5 Å
Organisms	Gallus gallus
Macromolecule	Stimulator of interferon genes protein (protein)
Unique Ligands	1SY

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6NT9 \| pdb_00006nt9	Download File View File

Cryo-EM structure of the complex between human TBK1 and chicken STING

Shang, G., Zhang, C., Chen, Z.J., Bai, X., Zhang, X.

(2019) Nature 567: 394-398

Released	2019-03-06
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Gallus gallus Homo sapiens
Macromolecule	Serine/threonine-protein kinase TBK1 (protein) Stimulator of interferon genes protein (protein)

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7UQ2 \| pdb_00007uq2	Download File View File

Vs.4 from T4 phage in complex with cGAMP

Jenson, J.M., Chen, Z.J.

(2023) Nature 616: 326-331

Released	2023-02-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Tequatrovirus
Macromolecule	Vs.4 (protein)
Unique Ligands	4BW, CA

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8DT3 \| pdb_00008dt3	Download File View File

Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined)

Sun, P.C., Fang, Y., Bai, X.C., Chen, Z.J.

(2022) Sci Immunol 7: eabp9962-eabp9962

Released	2022-08-03
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Mus musculus Severe acute respiratory syndrome coronavirus 2
Macromolecule	Heavy chain Fab of SW186 (protein) Light chain Fab of SW186 (protein) Spike glycoprotein (protein)
Unique branched monosaccharides	FUC, NAG

1 to 25 of 25 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2VCY | pdb_00002vcy

3J6C | pdb_00003j6c

4F9E | pdb_00004f9e

4F9G | pdb_00004f9g

4JBO | pdb_00004jbo

4JBP | pdb_00004jbp

4JBQ | pdb_00004jbq

4KSY | pdb_00004ksy

4NQK | pdb_00004nqk

4O67 | pdb_00004o67

4O68 | pdb_00004o68

4O69 | pdb_00004o69

4O6A | pdb_00004o6a

4O9F | pdb_00004o9f

4O9L | pdb_00004o9l

5BQX | pdb_00005bqx

6N34 | pdb_00006n34

6N3H | pdb_00006n3h

6NT5 | pdb_00006nt5

6NT6 | pdb_00006nt6

6NT7 | pdb_00006nt7

6NT8 | pdb_00006nt8

6NT9 | pdb_00006nt9

7UQ2 | pdb_00007uq2

8DT3 | pdb_00008dt3