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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Cantone, N."

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

Homo sapiens (18)

Taxonomy

Eukaryota (18)

Experimental Method

X-RAY DIFFRACTION (18)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (6)
	2.0 - 2.5 (3)
	3.0 - 3.5 (2)

Release Date

	2015 - 2019 (12)
	2020 - 2024 (6)

Enzyme Classification Name

	Transferases (14)
	Hydrolases (2)

Symmetry Type

	Asymmetric (14)
	Cyclic (4)

SCOP Classification

	All alpha proteins (5)
	All beta proteins (1)

AllSelected

1 to 18 of 18 Structures

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5HLS \| pdb_00005hls	Download File View File

Crystal structure of the first bromodomain of human BRD4 bound to CPI-0610

Jayaram, H., Poy, F., Setser, J.W., Bellon, S.F.

(2016) J Med Chem 59: 1330-1339

Released	2016-02-10
Method	X-RAY DIFFRACTION 2.182 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	62G

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5HM0 \| pdb_00005hm0	Download File View File

Crystal structure of the first bromodomain of human BRD4 bound to benzoisoxazoloazepine 3

Jayaram, H., Poy, F., Setser, J.W., Bellon, S.F.

(2016) J Med Chem 59: 1330-1339

Released	2016-02-10
Method	X-RAY DIFFRACTION 1.395 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	62V

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5I83 \| pdb_00005i83	Download File View File

Crystal structure of the bromodomain of human CREBBP bound to the benzodiazepinone G02773986

Jayaram, H., Poy, F., Setser, J.W., Bellon, S.F.

(2016) ACS Med Chem Lett 7: 531-536

Released	2016-04-20
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens
Macromolecule	CREB-binding protein (protein)
Unique Ligands	68Y, SCN

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5I86 \| pdb_00005i86	Download File View File

Crystal structure of the bromodomain of human CREBBP bound to the benzodiazepinone G02778174

Jayaram, H., Poy, F., Setser, J.W., Bellon, S.F.

(2016) ACS Med Chem Lett 7: 531-536

Released	2016-04-20
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Homo sapiens
Macromolecule	CREB-binding protein (protein)
Unique Ligands	69A, EDO, SCN

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5I89 \| pdb_00005i89	Download File View File

Crystal structure of the bromodomain of human CREBBP bound to the benzodiazepinone G02857790

Setser, J.W., Poy, F., Bellon, S.F.

(2016) ACS Med Chem Lett 7: 531-536

Released	2016-04-20
Method	X-RAY DIFFRACTION 1.07 Å
Organisms	Homo sapiens
Macromolecule	CREB-binding protein (protein)
Unique Ligands	69B, ACT, CA

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5I8B \| pdb_00005i8b	Download File View File

CBP in complex with Cpd23 ((R)-6-(3-(benzyloxy)phenyl)-4-methyl-1,3,4,5-tetrahydro-2H-benzo[b][1,4]diazepin-2-one)

Murray, J.M.

(2016) ACS Med Chem Lett 7: 531-536

Released	2016-04-20
Method	X-RAY DIFFRACTION 1.5218 Å
Organisms	Homo sapiens
Macromolecule	CREB-binding protein (protein)
Unique Ligands	69F, B3P, EDO, NA, PEG, ZN

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5I8G \| pdb_00005i8g	Download File View File

CBP in complex with Cpd637 ((R)-4-methyl-6-(1-methyl-3-(1-methyl-1H-pyrazol-4-yl)-1H-indazol-5-yl)-1,3,4,5-tetrahydro-2H-benzo[b][1,4]diazepin-2-one)

Murray, J.M.

(2016) ACS Med Chem Lett 7: 531-536

Released	2016-04-20
Method	X-RAY DIFFRACTION 1.41 Å
Organisms	Homo sapiens
Macromolecule	CREB-binding protein (protein)
Unique Ligands	69E, B3P, EDO, NA, PEG, ZN

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5JHN \| pdb_00005jhn	Download File View File

Structure of G9a SET-domain with Histone H3K9Ala mutant peptide and bound S-adenosylmethionine

Jayaram, H., Bellon, S.F., Poy, F.

(2016) Proc Natl Acad Sci U S A 113: 6182-6187

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Homo sapiens
Macromolecule	Histone H3.1 peptide with K9A mutation (protein) Histone-lysine N-methyltransferase EHMT2 (protein)
Unique Ligands	SAM, ZN

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5JIN \| pdb_00005jin	Download File View File

Structure of G9a SET-domain with Histone H3K9M mutant peptide and bound S-adenosylmethionine

Jayaram, H., Bellon, S.F., Poy, F.

(2016) Proc Natl Acad Sci U S A 113: 6182-6187

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Histone H3.1 peptide with K9M mutation (protein) Histone-lysine N-methyltransferase EHMT2 (protein)
Unique Ligands	SAM, ZN

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5JIY \| pdb_00005jiy	Download File View File

Structure of G9a SET-domain with Histone H3K9norLeucine mutant peptide and bound S-adenosylmethionine

Jayaram, H., Bellon, S.F., Poy, F.

(2016) Proc Natl Acad Sci U S A 113: 6182-6187

Released	2016-09-14
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Homo sapiens
Macromolecule	Histone H3.1 mutant peptide with H3K9nor-leucine (protein) Histone-lysine N-methyltransferase EHMT2 (protein)
Unique Ligands	SAM, ZN

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5JJ0 \| pdb_00005jj0	Download File View File

Structure of G9a SET-domain with Histone H3K9M peptide and excess SAH

Jayaram, H., Bellon, S.F., Poy, F.

(2016) Proc Natl Acad Sci U S A 113: 6182-6187

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Homo sapiens
Macromolecule	Histone H3K9M mutant peptide (protein) Histone-lysine N-methyltransferase EHMT2 (protein)
Unique Ligands	SAM, ZN

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5LS6 \| pdb_00005ls6	Download File View File

Structure of Human Polycomb Repressive Complex 2 (PRC2) with inhibitor

Zhang, Y., Justin, N., Chen, S., Wilson, J., Gamblin, S.

(2016) J Med Chem 59: 9928-9941

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.47 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2,Histone-lysine N-methyltransferase EZH2,Histone-lysine N-methyltransferase EZH2 (protein) Jarid2 K116me3 (protein) Polycomb protein EED (protein) Polycomb protein SUZ12 (protein)
Unique Ligands	74D, ZN

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6V8B \| pdb_00006v8b	Download File View File

Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 1

Gardberg, A.S.

(2020) ChemMedChem 15: 955-960

Released	2020-04-01
Method	X-RAY DIFFRACTION 3.13 Å
Organisms	Homo sapiens
Macromolecule	Histone acetyltransferase p300 (protein)
Unique Ligands	CL, QRY, SO4

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6V8K \| pdb_00006v8k	Download File View File

Crystal structure of the p300 acetyltransferase domain with peptide-competitive inhibitor 2

Gardberg, A.S.

(2020) ChemMedChem 15: 955-960

Released	2020-04-01
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Homo sapiens
Macromolecule	Histone acetyltransferase p300 (protein)
Unique Ligands	COA, DMS, QS4

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6V8N \| pdb_00006v8n	Download File View File

Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 17

Gardberg, A.S., Wilson, J.E.

(2020) ChemMedChem 15: 955-960

Released	2020-04-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Histone acetyltransferase p300 (protein)
Unique Ligands	CL, QS1, SO4

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6V90 \| pdb_00006v90	Download File View File

Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 12

Gardberg, A.S.

(2020) ChemMedChem 15: 955-960

Released	2020-04-01
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens
Macromolecule	Histone acetyltransferase p300 (protein)
Unique Ligands	CL, QSD, SO4

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7TAB \| pdb_00007tab	Download File View File

G-925 bound to the SMARCA4 (BRG1) Bromodomain

Tang, Y., Poy, F., Taylor, A.M., Cochran, A.G., Bellon, S.F.

(2022) J Med Chem 65: 11177-11186

Released	2022-08-17
Method	X-RAY DIFFRACTION 1.16 Å
Organisms	Homo sapiens
Macromolecule	Isoform 4 of Transcription activator BRG1 (protein)
Unique Ligands	GGU

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7TD9 \| pdb_00007td9	Download File View File

G-059 bound to the SMARCA4 (BRG1) Bromodomain

Tang, Y., Poy, F., Taylor, A.M., Cochran, A.G., Bellon, S.F.

(2022) J Med Chem 65: 11177-11186

Released	2022-08-17
Method	X-RAY DIFFRACTION 1.61 Å
Organisms	Homo sapiens
Macromolecule	Isoform 4 of Transcription activator BRG1 (protein)
Unique Ligands	GJN

1 to 18 of 18 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

5HLS | pdb_00005hls

Crystal structure of the first bromodomain of human BRD4 bound to CPI-0610

5HM0 | pdb_00005hm0

Crystal structure of the first bromodomain of human BRD4 bound to benzoisoxazoloazepine 3

5I83 | pdb_00005i83

Crystal structure of the bromodomain of human CREBBP bound to the benzodiazepinone G02773986

5I86 | pdb_00005i86

Crystal structure of the bromodomain of human CREBBP bound to the benzodiazepinone G02778174

5I89 | pdb_00005i89

Crystal structure of the bromodomain of human CREBBP bound to the benzodiazepinone G02857790

5I8B | pdb_00005i8b

CBP in complex with Cpd23 ((R)-6-(3-(benzyloxy)phenyl)-4-methyl-1,3,4,5-tetrahydro-2H-benzo[b][1,4]diazepin-2-one)

5I8G | pdb_00005i8g

CBP in complex with Cpd637 ((R)-4-methyl-6-(1-methyl-3-(1-methyl-1H-pyrazol-4-yl)-1H-indazol-5-yl)-1,3,4,5-tetrahydro-2H-benzo[b][1,4]diazepin-2-one)

5JHN | pdb_00005jhn

Structure of G9a SET-domain with Histone H3K9Ala mutant peptide and bound S-adenosylmethionine

5JIN | pdb_00005jin

Structure of G9a SET-domain with Histone H3K9M mutant peptide and bound S-adenosylmethionine

5JIY | pdb_00005jiy

Structure of G9a SET-domain with Histone H3K9norLeucine mutant peptide and bound S-adenosylmethionine

5JJ0 | pdb_00005jj0

Structure of G9a SET-domain with Histone H3K9M peptide and excess SAH

5LS6 | pdb_00005ls6

Structure of Human Polycomb Repressive Complex 2 (PRC2) with inhibitor

6V8B | pdb_00006v8b

Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 1

6V8K | pdb_00006v8k

Crystal structure of the p300 acetyltransferase domain with peptide-competitive inhibitor 2

6V8N | pdb_00006v8n

Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 17

6V90 | pdb_00006v90

Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 12

7TAB | pdb_00007tab

G-925 bound to the SMARCA4 (BRG1) Bromodomain

7TD9 | pdb_00007td9

G-059 bound to the SMARCA4 (BRG1) Bromodomain

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

5HLS | pdb_00005hls

5HM0 | pdb_00005hm0

5I83 | pdb_00005i83

5I86 | pdb_00005i86

5I89 | pdb_00005i89

5I8B | pdb_00005i8b

5I8G | pdb_00005i8g

5JHN | pdb_00005jhn

5JIN | pdb_00005jin

5JIY | pdb_00005jiy

5JJ0 | pdb_00005jj0

5LS6 | pdb_00005ls6

6V8B | pdb_00006v8b

6V8K | pdb_00006v8k

6V8N | pdb_00006v8n

6V90 | pdb_00006v90

7TAB | pdb_00007tab

7TD9 | pdb_00007td9