RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Ascher, D.B."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 119 Structures.

Refinements

Structure Determination Methodology

experimental (119)

Scientific Name of Source Organism

	Mus musculus (73)
	Homo sapiens (42)
	Equine arteritis virus Bucyrus (1)
	Escherichia coli (1)
	Mason-Pfizer monkey virus (1)
	synthetic construct (1)

Taxonomy

	Eukaryota (114)
	Riboviria (2)
	Bacteria (1)
	Eukaryota (eukaryotes) (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (103)
	SOLUTION NMR (16)

Polymer Entity Type

	Protein (117)
	RNA (5)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (32)
	1.5 - 2.0 (62)
	2.0 - 2.5 (6)
	2.5 - 3.0 (3)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (6)
	2005 - 2009 (6)
	2010 - 2014 (8)
	2015 - 2019 (15)
	2020 - 2024 (81)

Enzyme Classification Name

	Transferases (73)
	Hydrolases (2)
	Isomerases (1)

Symmetry Type

	Asymmetric (113)
	Cyclic (5)

SCOP Classification

	Alpha and beta proteins (a+b) (78)
	All beta proteins (22)
	All alpha proteins (6)
	Alpha and beta proteins (a/b) (2)
	Artifacts (4)

AllSelected

1 to 25 of 119 Structures

Page 1 of 5

Sort by

Explore in 3D

1AL5 \| pdb_00001al5	Download File View File

A-TRACT RNA DODECAMER, NMR, 12 STRUCTURES

Conte, M.R., Conn, G.L., Brown, T., Lane, A.N.

(1997) Nucleic Acids Res 25: 2627-2634

Released	1997-12-17
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	RNA (5'-R(CPGPCPAPAPAPUPUPUPGPCPG)-3') (nucleic acid)

Explore in 3D

1BAX \| pdb_00001bax	Download File View File

MASON-PFIZER MONKEY VIRUS MATRIX PROTEIN, NMR, AVERAGE STRUCTURE

Conte, M.R., Klikova, M., Hunter, E., Ruml, T., Matthews, S.

(1997) EMBO J 16: 5819-5826

Released	1998-06-17
Method	SOLUTION NMR
Organisms	Mason-Pfizer monkey virus
Macromolecule	M-PMV MATRIX PROTEIN (protein)

Explore in 3D

1OWX \| pdb_00001owx	Download File View File

Solution structure of the C-terminal RRM of human La (La225-334)

Jacks, A., Babon, J., Kelly, G., Manolaridis, I., Cary, P.D., Curry, S., Conte, M.R.

(2003) Structure 11: 833-843

Released	2003-07-29
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Lupus La protein (protein)

Explore in 3D

1QM9 \| pdb_00001qm9	Download File View File

NMR, REPRESENTATIVE STRUCTURE

Conte, M.R., Grune, T., Curry, S., Matthews, S.

(2000) EMBO J 19: 3132

Released	2000-07-03
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	POLYPYRIMIDINE TRACT-BINDING PROTEIN (protein)

Explore in 3D

1S79 \| pdb_00001s79	Download File View File

Solution structure of the central RRM of human La protein

Alfano, C., Sanfelice, D., Babon, J., Kelly, G., Jacks, A., Curry, S., Conte, M.R.

(2004) Nat Struct Mol Biol 11: 323-329

Released	2004-04-06
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Lupus La protein (protein)

Explore in 3D

1S7A \| pdb_00001s7a	Download File View File

NMR structure of the La motif of human La protein

Alfano, C., Sanfelice, D., Babon, J., Kelly, G., Jacks, A., Curry, S., Conte, M.R.

(2004) Nat Struct Mol Biol 11: 323-329

Released	2004-04-06
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Lupus La protein (protein)

Explore in 3D

1SAA \| pdb_00001saa	Download File View File

ATF-2 RECOGNITION SITE, NMR, 10 STRUCTURES

Conte, M.R., Lane, A.N., Bloomberg, G.

(1997) Nucleic Acids Res 25: 3808-3815

Released	1997-11-12
Method	SOLUTION NMR
Macromolecule	DNA (5'-D(CPAPTPGPTPGPAPCPGPTPCPAPCPAPTPG)-3') (nucleic acid)

Explore in 3D

1SJQ \| pdb_00001sjq	Download File View File

NMR Structure of RRM1 from Human Polypyrimidine Tract Binding Protein Isoform 1 (PTB1)

Simpson, P.J., Monie, T.P., Szendroi, A., Davydova, N., Tyzack, J.K., Conte, M.R., Read, C.M., Cary, P.D., Svergun, D.I., Konarev, P.V., Petoukhov, M.V., Curry, S., Matthews, S.J.

(2004) Structure 12: 1631-1643

Released	2004-09-14
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Polypyrimidine tract-binding protein 1 (protein)

Explore in 3D

1SJR \| pdb_00001sjr	Download File View File

NMR Structure of RRM2 from Human Polypyrimidine Tract Binding Protein Isoform 1 (PTB1)

Simpson, P.J., Monie, T.P., Szendroi, A., Davydova, N., Tyzack, J.K., Conte, M.R., Read, C.M., Cary, P.D., Svergun, D.I., Konarev, P.V., Petoukhov, M.V., Curry, S., Matthews, S.J.

(2004) Structure 12: 1631-1643

Released	2004-09-14
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Polypyrimidine tract-binding protein 1 (protein)

Explore in 3D

2G2K \| pdb_00002g2k	Download File View File

NMR structure of an N-terminal fragment of the eukaryotic initiation factor 5 (eIF5)

Conte, M.R., Kelly, G., Babon, J., Sanfelice, D., Smerdon, S.J., Proud, C.G.

(2006) Biochemistry 45: 4550-4558

Released	2006-06-13
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 5 (protein)

Explore in 3D

2KFW \| pdb_00002kfw	Download File View File

Solution structure of full-length SlyD from E.coli

Martino, L., He, Y., Hands-Taylor, K.L., Valentine, E.R., Kelly, G., Giancola, C., Conte, M.R.

(2009) FEBS J 276: 4529-4544

Released	2009-09-15
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	FKBP-type peptidyl-prolyl cis-trans isomerase slyD (protein)

Explore in 3D

2L8K \| pdb_00002l8k	Download File View File

NMR Structure of the Arterivirus nonstructural protein 7 alpha (nsp7 alpha)

Conte, M.R., Gaudin, C., Manolaridis, I., Tucker, P.W., Kelly, G.

(2011) J Virol 85: 7449-7453

Released	2011-07-06
Method	SOLUTION NMR
Organisms	Equine arteritis virus Bucyrus
Macromolecule	Non-structural protein 7 (protein)

Explore in 3D

2MTF \| pdb_00002mtf	Download File View File

Solution structure of the La motif of human LARP6

Martino, L., Salisbury, N.JH., Atkinson, A.R., Kelly, G., Conte, M.R.

(2015) Nucleic Acids Res 43: 645-660

Released	2014-12-24
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	La-related protein 6 (protein)

Explore in 3D

2MTG \| pdb_00002mtg	Download File View File

Solution structure of the RRM1 of human LARP6

Martino, L., Atkinson, A.R., Kelly, G., Conte, M.R.

(2015) Nucleic Acids Res 43: 645-660

Released	2014-12-24
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	La-related protein 6 (protein)

Explore in 3D

2VOD \| pdb_00002vod	Download File View File

Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUAUUUU

Kotik-Kogan, O., Valentine, E.R., Sanfelice, D., Conte, M.R., Curry, S.

(2008) Structure 16: 852

Released	2008-05-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	LUPUS LA PROTEIN (protein) 5'-R(APUPAPUPUPUP*UP)-3' (nucleic acid)

Explore in 3D

2VON \| pdb_00002von	Download File View File

Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUAAUUU

Kotik-Kogan, O., Valentine, E.R., Sanfelice, D., Conte, M.R., Curry, S.

(2008) Structure 16: 852

Released	2008-05-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	LUPUS LA PROTEIN (protein) 5'-R(APUPAPAPUPUP*UP)-3' (nucleic acid)

Explore in 3D

2VOO \| pdb_00002voo	Download File View File

Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer UUUUUUUU

Kotik-Kogan, O., Valentine, E.R., Sanfelice, D., Conte, M.R., Curry, S.

(2008) Structure 16: 852

Released	2008-05-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	LUPUS LA PROTEIN (protein) 5'-R(UPUPUPUPUPUP*UP)-3' (nucleic acid)

Explore in 3D

2VOP \| pdb_00002vop	Download File View File

Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUUUU

Kotik-Kogan, O., Valentine, E.R., Sanfelice, D., Conte, M.R., Curry, S.

(2008) Structure 16: 852

Released	2008-05-06
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LUPUS LA PROTEIN (protein) 5'-R(APUPUPUP*UP)-3' (nucleic acid)
Unique Ligands	SO4

Explore in 3D

3PKN \| pdb_00003pkn	Download File View File

Crystal structure of MLLE domain of poly(A) binding protein in complex with PAM2 motif of La-related protein 4 (LARP4)

Xie, J., Kozlov, G., Gehring, K.

(2011) Mol Cell Biol 31: 542-556

Released	2011-01-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	La-related protein 4 (protein) Polyadenylate-binding protein 1 (protein)
Unique Ligands	IOD, SO4

Explore in 3D

4CPG \| pdb_00004cpg	Download File View File

Solution structure of the SGTA N-terminal domain

Darby, J.F., Krysztofinska, E.M., Simpson, P.J., Isaacson, R.L.

(2014) PLoS One 9: 11328

Released	2014-12-03
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ALPHA (protein)

Explore in 3D

4LOO \| pdb_00004loo	Download File View File

Structural basis of autoactivation of p38 alpha induced by TAB1 (Monoclinic crystal form)

Chaikuad, A., DeNicola, G.F., Krojer, T., Allerston, C.K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Marber, M.S., Knapp, S., Structural Genomics Consortium (SGC)

(2013) Nat Struct Mol Biol 20: 1182-1190

Released	2013-08-21
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Mus musculus
Macromolecule	Mitogen-activated protein kinase 14 (protein) TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 (protein)
Unique Ligands	SB4

Explore in 3D

4LOP \| pdb_00004lop	Download File View File

Structural basis of autoactivation of p38 alpha induced by TAB1 (Tetragonal crystal form)

Chaikuad, A., DeNicola, G.F., Krojer, T., Allerston, C.K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Marber, M.S., Knapp, S., Structural Genomics Consortium (SGC)

(2013) Nat Struct Mol Biol 20: 1182-1190

Released	2013-08-21
Method	X-RAY DIFFRACTION 2.049 Å
Organisms	Mus musculus
Macromolecule	Mitogen-activated protein kinase 14 (protein) TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 (protein)
Unique Ligands	EDO, SB4, TLA

Explore in 3D

4LOQ \| pdb_00004loq	Download File View File

Structural basis of autoactivation of p38 alpha induced by TAB1 (Tetragonal crystal form with bound sulphate)

Chaikuad, A., DeNicola, G.F., Yue, W.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Marber, M.S., Knapp, S., Structural Genomics Consortium (SGC)

(2013) Nat Struct Mol Biol 20: 1182-1190

Released	2013-08-21
Method	X-RAY DIFFRACTION 2.319 Å
Organisms	Mus musculus
Macromolecule	Mitogen-activated protein kinase 14 (protein) TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 (protein)
Unique Ligands	EDO, SB4, SO4

Explore in 3D

5IFM \| pdb_00005ifm	Download File View File

Human NONO (p54nrb) Homodimer

Knott, G.J., Bond, C.S.

(2016) Acta Crystallogr D Struct Biol 72: 761-769

Released	2016-11-09
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Non-POU domain-containing octamer-binding protein (protein)
Unique Ligands	CL, GOL, K, PRO

Explore in 3D

5O90 \| pdb_00005o90	Download File View File

Crystal structure of a P38alpha T185G mutant in complex with TAB1 peptide.

Nichols, C.E., De Nicola, G.F., Thapa, D.

(2018) Mol Cell Biol 38:

Released	2018-01-31
Method	X-RAY DIFFRACTION 2.49 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Mitogen-activated protein kinase 14 (protein) TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 (protein)
Unique Ligands	SB4

1 to 25 of 119 Structures

Page 1 of 5

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AL5 | pdb_00001al5

1BAX | pdb_00001bax

1OWX | pdb_00001owx

1QM9 | pdb_00001qm9

1S79 | pdb_00001s79

1S7A | pdb_00001s7a

1SAA | pdb_00001saa

1SJQ | pdb_00001sjq

1SJR | pdb_00001sjr

2G2K | pdb_00002g2k

2KFW | pdb_00002kfw

2L8K | pdb_00002l8k

2MTF | pdb_00002mtf

2MTG | pdb_00002mtg

2VOD | pdb_00002vod

2VON | pdb_00002von

2VOO | pdb_00002voo

2VOP | pdb_00002vop

3PKN | pdb_00003pkn

4CPG | pdb_00004cpg

4LOO | pdb_00004loo

4LOP | pdb_00004lop

4LOQ | pdb_00004loq

5IFM | pdb_00005ifm

5O90 | pdb_00005o90