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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Pearson, A.R."

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Search Summary

This query matches 67 Structures.

Refinements

Structure Determination Methodology

experimental (67)

Scientific Name of Source Organism

	Mycothermus thermophilus (18)
	Escherichia coli (15)
	Escherichia coli K-12 (6)
	Homo sapiens (4)
	Staphylococcus aureus subsp. aureus NCTC 8325 (4)
	Escherichia coli BL21(DE3) (3)
	Paracoccus denitrificans (3)
	Equine rhinitis A virus (2)
	Nitrosomonas europaea (2)
	Turnip crinkle virus (2)

More...

Taxonomy

	Bacteria (35)
	Eukaryota (25)
	Riboviria (6)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (62)
	ELECTRON MICROSCOPY (4)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (67)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (31)
	2.0 - 2.5 (17)
	2.5 - 3.0 (4)
	3.0 - 3.5 (1)
	3.5 - 4.0 (2)
	> 4.5 (4)

Release Date

	2005 - 2009 (8)
	2010 - 2014 (34)
	2015 - 2019 (20)
	2020 - 2024 (5)

Enzyme Classification Name

	Oxidoreductases (29)
	Lyases (23)
	Hydrolases (1)
	Translocases (1)

Membrane Protein Annotation

	MemProtMD (2)
	OPM (1)
	PDBTM (1)

Symmetry Type

	Dihedral (33)
	Cyclic (21)
	Asymmetric (9)
	Icosahedral (5)

SCOP Classification

	Alpha and beta proteins (a/b) (14)
	All beta proteins (16)
	Artifacts (15)
	Alpha and beta proteins (a+b) (7)
	Small proteins (3)
	All alpha proteins (1)

AllSelected

1 to 25 of 67 Structures

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2CKJ \| pdb_00002ckj	Download File View File

Human milk xanthine oxidoreductase

Pearson, A.R., Godber, B.L.J., Eisenthal, R., Taylor, G.L., Harrison, R.

To be published

Released	2007-05-29
Method	X-RAY DIFFRACTION 3.59 Å
Organisms	Homo sapiens
Macromolecule	XANTHINE OXIDOREDUCTASE (protein)
Unique Ligands	ACY, FAD, FES, GOL, PO4

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2J55 \| pdb_00002j55	Download File View File

X-ray reduced Paraccocus denitrificans methylamine dehydrogenase O- quinone in complex with amicyanin.

Pearson, A.R., Pahl, R., Davidson, V.L., Wilmot, C.M.

(2007) J Synchrotron Radiat 14: 92

Released	2007-01-23
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Paracoccus denitrificans
Macromolecule	AMICYANIN (protein) METHYLAMINE DEHYDROGENASE HEAVY CHAIN (protein) METHYLAMINE DEHYDROGENASE LIGHT CHAIN (protein)
Unique Ligands	CU, GOL

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2J56 \| pdb_00002j56	Download File View File

X-ray reduced Paraccocus denitrificans methylamine dehydrogenase N- semiquinone in complex with amicyanin.

Pearson, A.R., Pahl, R., Davidson, V.L., Wilmot, C.M.

(2007) J Synchrotron Radiat 14: 92

Released	2007-01-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Paracoccus denitrificans
Macromolecule	AMICYANIN (protein) METHYLAMINE DEHYDROGENASE HEAVY CHAIN (protein) METHYLAMINE DEHYDROGENASE LIGHT CHAIN (protein)
Unique Ligands	CU, GOL, NA

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2J57 \| pdb_00002j57	Download File View File

X-ray reduced Paraccocus denitrificans methylamine dehydrogenase N- quinol in complex with amicyanin.

Pearson, A.R., Pahl, R., Davidson, V.L., Wilmot, C.M.

(2007) J Synchrotron Radiat 14: 92

Released	2007-01-23
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Paracoccus denitrificans
Macromolecule	AMICYANIN (protein) METHYLAMINE DEHYDROGENASE HEAVY CHAIN (protein) METHYLAMINE DEHYDROGENASE LIGHT CHAIN (protein)
Unique Ligands	CU

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2JE2 \| pdb_00002je2	Download File View File

Cytochrome P460 from Nitrosomonas europaea - probable nonphysiological oxidized form

Pearson, A.R., Elmore, B.O., Yang, C., Ferrara, J.D., Hooper, A.B., Wilmot, C.M.

(2007) Biochemistry 46: 8340

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Nitrosomonas europaea
Macromolecule	CYTOCHROME P460 (protein)
Unique Ligands	HEC, PO4

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2JE3 \| pdb_00002je3	Download File View File

Cytochrome P460 from Nitrosomonas europaea - probable physiological form

Pearson, A.R., Elmore, B.O., Yang, C., Ferrara, J.D., Hooper, A.B., Wilmot, C.M.

(2007) Biochemistry 46: 8340

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Nitrosomonas europaea
Macromolecule	CYTOCHROME P460 (protein)
Unique Ligands	HEC, PO4

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2W0Q \| pdb_00002w0q	Download File View File

E. coli copper amine oxidase in complex with Xenon

Pirrat, P., Smith, M.A., Pearson, A.R., McPherson, M.J., Phillips, S.E.V.

(2008) Acta Crystallogr Sect F Struct Biol Cryst Commun 64: 1105

Released	2008-12-16
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Escherichia coli
Macromolecule	COPPER AMINE OXIDASE (protein)
Unique Ligands	CA, CU, XE

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2WKJ \| pdb_00002wkj	Download File View File

Crystal structure of the E192N mutant of E. Coli N-acetylneuraminic acid lyase in complex with pyruvate at 1.45A resolution in space group P212121

Campeotto, I., Carr, S.B., Trinh, C.H., Nelson, A.S., Berry, A., Phillips, S.E.V., Pearson, A.R.

(2009) Acta Crystallogr Sect F Struct Biol Cryst Commun 65: 1088-1090

Released	2009-12-01
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Escherichia coli
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)
Unique Ligands	1PE, PYR

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2WNN \| pdb_00002wnn	Download File View File

Structure of wild type E. coli N-acetylneuraminic acid lyase in complex with pyruvate in space group P21

Campeotto, I., Bolt, A.H., Harman, T.A., Trinh, C.H., Dennis, C.A., Phillips, S.E.V., Pearson, A.R., Nelson, A., Berry, A.

(2010) J Mol Biology 404: 56

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)
Unique Ligands	1PE, NA

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2WNQ \| pdb_00002wnq	Download File View File

Structure of the E192N mutant of E. coli N-acetylneuraminic acid lyase in space group P21

Campeotto, I., Bolt, A.H., Harman, T.A., Trinh, C.H., Dennis, C.A., Phillips, S.E.V., Pearson, A.R., Nelson, A., Berry, A.

(2010) J Mol Biology 404: 56

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)
Unique Ligands	CL

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2WNZ \| pdb_00002wnz	Download File View File

Structure of the E192N mutant of E. coli N-acetylneuraminic acid lyase in complex with pyruvate in space group P21 crystal form I

Campeotto, I., Bolt, A.H., Harman, T.A., Trinh, C.H., Dennis, C.A., Phillips, S.E.V., Pearson, A.R., Nelson, A., Berry, A.

(2010) J Mol Biology 404: 56

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)
Unique Ligands	2OP, ETX, LAC

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2WO0 \| pdb_00002wo0	Download File View File

EDTA treated E. coli copper amine oxidase

Smith, M.A., Pirrat, P., Pearson, A.R., Knowles, P.F., Phillips, S.E.V., McPherson, M.J.

(2010) Biochemistry 49: 1268

Released	2010-05-05
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	PRIMARY AMINE OXIDASE (protein)
Unique Ligands	CU, NA

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2WO5 \| pdb_00002wo5	Download File View File

Structure of wild type E. coli N-acetylneuraminic acid lyase in space group P21 crystal form I

Campeotto, I., Bolt, A.H., Harman, T.A., Trinh, C.H., Dennis, C.A., Phillips, S.E.V., Pearson, A.R., Nelson, A., Berry, A.

(2010) J Mol Biology 404: 56

Released	2010-08-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)

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2WOF \| pdb_00002wof	Download File View File

EDTA treated E. coli copper amine oxidase

Smith, M.A., Pirrat, P., Pearson, A.R., Knowles, P.F., Phillips, S.E.V., McPherson, M.J.

(2010) Biochemistry 49: 1268

Released	2010-05-05
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Escherichia coli
Macromolecule	PRIMARY AMINE OXIDASE (protein)
Unique Ligands	CU, NA

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2WOH \| pdb_00002woh	Download File View File

Strontium soaked E. coli copper amine oxidase

Smith, M.A., Pirrat, P., Pearson, A.R., Knowles, P.F., Phillips, S.E.V., McPherson, M.J.

(2010) Biochemistry 49: 1268

Released	2010-05-05
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli
Macromolecule	PRIMARY AMINE OXIDASE (protein)
Unique Ligands	CA, CU, SR

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2WPB \| pdb_00002wpb	Download File View File

Crystal structure of the E192N mutant of E. Coli N-acetylneuraminic acid lyase in complex with pyruvate and the inhibitor (2R,3R)-2,3,4- trihydroxy-N,N-dipropylbutanamide in space group P21 crystal form I

Campeotto, I., Bolt, A.H., Harman, T.A., Trinh, C.H., Dennis, C.A., Phillips, S.E.V., Pearson, A.R., Nelson, A., Berry, A.

(2010) J Mol Biology 404: 56

Released	2010-08-25
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Escherichia coli
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)
Unique Ligands	ZZI

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2XFW \| pdb_00002xfw	Download File View File

Structure of the E192N mutant of E. coli N-acetylneuraminic acid lyase in complex with pyruvate in crystal form III

Campeotto, I., Murshudov, G.N., Bolt, A.H., Trinh, C.H., Phillips, S.E.V., Nelson, A., Pearson, A.R., Berry, A.

To be published

Released	2010-09-22
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli
Macromolecule	N-ACETYLNEURAMINIC ACID LYASE (protein)
Unique Ligands	1PE, PYR

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2YGY \| pdb_00002ygy	Download File View File

Structure of wild type E. coli N-acetylneuraminic acid lyase in space group P21 crystal form II

Campeotto, I., Nelson, A., Berry, A., Phillips, S.E.V., Pearson, A.R.

(2018) Sci Rep 8: 14876-14876

Released	2012-04-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)
Unique Ligands	1PE, CL

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3ZD0 \| pdb_00003zd0	Download File View File

The Solution Structure of Monomeric Hepatitis C Virus p7 Yields Potent Inhibitors of Virion Release

Foster, T.L., Sthompson, G., Kalverda, A.P., Kankanala, J., Thompson, J., Barker, A.M., Clarke, D., Noerenberg, M., Pearson, A.R., Rowlands, D.J., Homans, S.W., Harris, M., Foster, R., Griffin, S.D.C.

(2014) Hepatology 59: 408

Released	2013-09-04
Method	SOLUTION NMR
Organisms	Hepacivirus hominis
Macromolecule	P7 PROTEIN (protein)

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3ZX8 \| pdb_00003zx8	Download File View File

Cryo-EM reconstruction of native and expanded Turnip Crinkle virus

Bakker, S.E., Robottom, J., Hogle, J.M., Maeda, A., Pearson, A.R., Stockley, P.G., Ranson, N.A., Harrison, S.C.

(2012) J Mol Biology 417: 65

Released	2012-07-18
Method	ELECTRON MICROSCOPY 11.5 Å
Organisms	Turnip crinkle virus
Macromolecule	CAPSID PROTEIN (protein)

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3ZX9 \| pdb_00003zx9	Download File View File

Cryo-EM reconstruction of native and expanded Turnip Crinkle virus

Bakker, S.E., Robottom, J., Pearson, A.R., Stockley, P.G., Ranson, N.A.

(2012) J Mol Biology 417: 65

Released	2012-07-18
Method	ELECTRON MICROSCOPY 17 Å
Organisms	Turnip crinkle virus
Macromolecule	CAPSID PROTEIN (protein)

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4AH7 \| pdb_00004ah7	Download File View File

Structure of Wild Type Stapylococcus aureus N-acetylneuraminic acid lyase in complex with pyruvate

Timms, N., Poyakova, A., Windle, C.L., Trinh, C.H., Nelson, A., Pearson, A.R., Berry, A.

(2013) Chembiochem 14: 474

Released	2013-01-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)

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4AMA \| pdb_00004ama	Download File View File

Crystal Structure of N-acetylneuraminic acid lyase from Staphylococcus aureus with the chemical modification thia-lysine at position 165 in complex with pyruvate

Timms, N., Polyakova, A., Windle, C.L., Trinh, C.H., Nelson, A., Pearson, A.R., Berry, A.

(2013) Chembiochem 14: 474-481

Released	2013-01-23
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Staphylococcus aureus subsp. aureus NCTC 8325
Macromolecule	N-ACETYLNEURAMINATE LYASE (protein)

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4AOK \| pdb_00004aok	Download File View File

Conformational dynamics of aspartate alpha-decarboxylase active site revealed by protein-ligand complexes: 1-methyl-L-aspartate complex

Yorke, B.A., Monteiro, D.C.F., Pearson, A.R., Webb, M.E.

To be published

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE 1-DECARBOXYLASE ALPHA CHAIN (protein) ASPARTATE 1-DECARBOXYLASE BETA CHAIN (protein)

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4AON \| pdb_00004aon	Download File View File

Conformational dynamics of aspartate alpha-decarboxylase active site revealed by protein-ligand complexes: 1-methyl-L-aspartate complex

Yorke, B.A., Monteiro, D.C.F., Pearson, A.R., Webb, M.E.

To be published

Released	2012-10-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli BL21
Macromolecule	ASPARTATE-ALPHA-DECARBOXYLASE ALPHA CHAIN (protein) ASPARTATE-ALPHA-DECARBOXYLASE BETA CHAIN (protein)
Unique Ligands	GLU

1 to 25 of 67 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2CKJ | pdb_00002ckj

2J55 | pdb_00002j55

2J56 | pdb_00002j56

2J57 | pdb_00002j57

2JE2 | pdb_00002je2

2JE3 | pdb_00002je3

2W0Q | pdb_00002w0q

2WKJ | pdb_00002wkj

2WNN | pdb_00002wnn

2WNQ | pdb_00002wnq

2WNZ | pdb_00002wnz

2WO0 | pdb_00002wo0

2WO5 | pdb_00002wo5

2WOF | pdb_00002wof

2WOH | pdb_00002woh

2WPB | pdb_00002wpb

2XFW | pdb_00002xfw

2YGY | pdb_00002ygy

3ZD0 | pdb_00003zd0

3ZX8 | pdb_00003zx8

3ZX9 | pdb_00003zx9

4AH7 | pdb_00004ah7

4AMA | pdb_00004ama

4AOK | pdb_00004aok

4AON | pdb_00004aon