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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Hasan, S.S."

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

Severe acute respiratory syndrome coronavirus 2 (20)

Taxonomy

Riboviria (20)

Experimental Method

ELECTRON MICROSCOPY (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	2.5 - 3.0 (1)
	3.0 - 3.5 (18)
	3.5 - 4.0 (1)

Release Date

2020 - 2024 (20)

Symmetry Type

Cyclic (20)

AllSelected

1 to 20 of 20 Structures

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Explore in 3D

8UIR \| pdb_00008uir	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8UK1 \| pdb_00008uk1	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer consensus (S-RRAR-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8UKD \| pdb_00008ukd	Download File View File

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747

Released	2024-06-19
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG

Explore in 3D

8UKF \| pdb_00008ukf	Download File View File

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-EG.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747

Released	2024-06-19
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0L \| pdb_00008v0l	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer 1 (S-RRAR-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0M \| pdb_00008v0m	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer 2 (S-RRAR-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0N \| pdb_00008v0n	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer 3 (S-RRAR-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0O \| pdb_00008v0o	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0P \| pdb_00008v0p	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0Q \| pdb_00008v0q	Download File View File

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-XBB.1.16)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0R \| pdb_00008v0r	Download File View File

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-XBB.1.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0S \| pdb_00008v0s	Download File View File

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-XBB.1.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0T \| pdb_00008v0t	Download File View File

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-XBB.1.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG

Explore in 3D

8V0U \| pdb_00008v0u	Download File View File

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 4 (S-GSAS-Omicron-XBB.1.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0V \| pdb_00008v0v	Download File View File

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0W \| pdb_00008v0w	Download File View File

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-EG.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

Explore in 3D

8V0X \| pdb_00008v0x	Download File View File

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-EG.5)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG

Explore in 3D

9AYW \| pdb_00009ayw	Download File View File

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5.1)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG

Explore in 3D

9AYX \| pdb_00009ayx	Download File View File

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-EG.5.1)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG

Explore in 3D

9AYY \| pdb_00009ayy	Download File View File

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-EG.5.1)

Zhang, Q.E., Acharya, P.

(2024) Mol Cell 84: 2747-2764.e7

Released	2024-06-12
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein)
Unique Ligands	NAG

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

8UIR | pdb_00008uir

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.16)

8UK1 | pdb_00008uk1

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer consensus (S-RRAR-Omicron-XBB.1.16)

8UKD | pdb_00008ukd

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.5)

8UKF | pdb_00008ukf

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-EG.5)

8V0L | pdb_00008v0l

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer 1 (S-RRAR-Omicron-XBB.1.16)

8V0M | pdb_00008v0m

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer 2 (S-RRAR-Omicron-XBB.1.16)

8V0N | pdb_00008v0n

SARS-CoV-2 Omicron-XBB.1.16 3-RBD-down Spike Protein Trimer 3 (S-RRAR-Omicron-XBB.1.16)

8V0O | pdb_00008v0o

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-XBB.1.16)

8V0P | pdb_00008v0p

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-XBB.1.16)

8V0Q | pdb_00008v0q

SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-XBB.1.16)

8V0R | pdb_00008v0r

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-XBB.1.5)

8V0S | pdb_00008v0s

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-XBB.1.5)

8V0T | pdb_00008v0t

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-XBB.1.5)

8V0U | pdb_00008v0u

SARS-CoV-2 Omicron-XBB.1.5 3-RBD down Spike Protein Trimer 4 (S-GSAS-Omicron-XBB.1.5)

8V0V | pdb_00008v0v

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5)

8V0W | pdb_00008v0w

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-EG.5)

8V0X | pdb_00008v0x

SARS-CoV-2 Omicron-EG.5 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-EG.5)

9AYW | pdb_00009ayw

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5.1)

9AYX | pdb_00009ayx

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-EG.5.1)

9AYY | pdb_00009ayy

SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-EG.5.1)

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8UIR | pdb_00008uir

8UK1 | pdb_00008uk1

8UKD | pdb_00008ukd

8UKF | pdb_00008ukf

8V0L | pdb_00008v0l

8V0M | pdb_00008v0m

8V0N | pdb_00008v0n

8V0O | pdb_00008v0o

8V0P | pdb_00008v0p

8V0Q | pdb_00008v0q

8V0R | pdb_00008v0r

8V0S | pdb_00008v0s

8V0T | pdb_00008v0t

8V0U | pdb_00008v0u

8V0V | pdb_00008v0v

8V0W | pdb_00008v0w

8V0X | pdb_00008v0x

9AYW | pdb_00009ayw

9AYX | pdb_00009ayx

9AYY | pdb_00009ayy