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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Engilberge, S."

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Search Summary

This query matches 112 Structures.

Refinements

Structure Determination Methodology

experimental (112)

Scientific Name of Source Organism

	synthetic construct (29)
	Ralstonia solanacearum (20)
	Methanosarcina mazei Go1 (18)
	Escherichia coli 2-427-07_S4_C3 (11)
	Cryphonectria parasitica (8)
	Methanothermococcus thermolithotrophicus (8)
	Gallus gallus (6)
	Saccharomyces cerevisiae S288C (6)
	Arabidopsis thaliana (4)
	Homo sapiens (4)

More...

Taxonomy

	Archaea (38)
	Bacteria (37)
	Eukaryota (34)
	other sequences (29)
	Duplodnaviria (4)

Experimental Method

X-RAY DIFFRACTION (112)

Polymer Entity Type

	Protein (112)
	DNA (18)
	RNA (2)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (22)
	1.5 - 2.0 (38)
	2.0 - 2.5 (33)
	2.5 - 3.0 (18)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (31)
	2020 - 2024 (80)

Enzyme Classification Name

	Hydrolases (22)
	Lyases (19)
	Transferases (10)
	Oxidoreductases (3)
	Ligases (1)

Symmetry Type

	Asymmetric (56)
	Cyclic (44)
	Dihedral (13)

SCOP Classification

	Alpha and beta proteins (a/b) (11)
	Alpha and beta proteins (a+b) (14)
	All alpha proteins (10)
	Artifacts (4)
	All beta proteins (1)

AllSelected

1 to 25 of 112 Structures

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4KII \| pdb_00004kii	Download File View File

Beta-lactoglobulin in complex with Cp*Rh(III)Cl N,N-di(pyridin-2-yl)dodecanamide

Cherrier, M.V., Amara, P., Engilberge, S., Fontecilla-Camps, J.C.

(2013) Eur J Inorg Chem 21: 3596-3600

Released	2013-09-04
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Bos taurus
Macromolecule	Beta-lactoglobulin (protein)
Unique Ligands	RHL

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5LD9 \| pdb_00005ld9	Download File View File

Structure of deubiquitinating enzyme homolog, Pyrococcus furiosus JAMM1.

Maupin-Furlow, J.A., Franzetti, B., Cao, S., Girard, E., Gabel, F., Engilberge, S.

(2017) Structure 25: 823-833.e6

Released	2017-05-17
Method	X-RAY DIFFRACTION 1.733 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	JAMM1 (protein)
Unique Ligands	CL, ZN

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5LDA \| pdb_00005lda	Download File View File

Structure of deubiquitinating enzyme homolog (Pyrococcus furiosus JAMM1) in complex with ubiquitin-like SAMP2.

Cao, S., Engilberge, S., Girard, E., Gabel, F., Franzetti, B., Maupin-Furlow, J.A.

(2017) Structure 25: 823-833.e6

Released	2017-06-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pyrococcus furiosus DSM 3638
Macromolecule	JAMM1 (protein) SAMP2 (protein)
Unique Ligands	GOL, ZN

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5MF2 \| pdb_00005mf2	Download File View File

Bacteriophage T5 distal tail protein pb9 co-crystallized with Tb-Xo4

Engilberge, S., Riobe, F., Di Pietro, S., Lassalle, L., Arnaud, C.-A., Breyton, C., Madern, D., Coquelle, N., Maury, O., Girard, E.

(2017) Chem Sci 8: 5909-5917

Released	2017-09-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Tequintavirus T5
Macromolecule	Distal tail protein (protein)
Unique Ligands	7MT, CL, TB

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5NGJ \| pdb_00005ngj	Download File View File

Crystal structure of pb6, major tail tube protein of bacteriophage T5

Arnaud, C.-A., Effantin, G., Vives, C., Engilberge, S., Bacia, M., Boulanger, P., Girard, E., Schoehn, G., Breyton, C.

(2017) Nat Commun 8: 1953-1953

Released	2018-01-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Tequintavirus T5
Macromolecule	Tail tube protein (protein)
Unique Ligands	CL

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6EQO \| pdb_00006eqo	Download File View File

Tri-functional propionyl-CoA synthase of Erythrobacter sp. NAP1 with bound NADP+ and phosphomethylphosphonic acid adenylate ester

Zarzycki, J., Bernhardsgruetter, I., Voegeli, B., Wagner, T., Engilberge, S., Girard, E., Shima, S., Erb, T.J.

(2018) Nat Chem Biol 14: 1127-1132

Released	2018-10-24
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Erythrobacter sp. NAP1
Macromolecule	Acetyl-coenzyme A synthetase (protein)
Unique Ligands	ACP, NAP

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6ESQ \| pdb_00006esq	Download File View File

Structure of the acetoacetyl-CoA thiolase/HMG-CoA synthase complex from Methanothermococcus thermolithotrophicus soaked with acetyl-CoA

Voegeli, B., Engilberge, S., Girard, E., Riobe, F., Maury, O., Erb, J.T., Shima, S., Wagner, T.

(2018) Proc Natl Acad Sci U S A 115: 3380-3385

Released	2018-03-14
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Methanothermococcus thermolithotrophicus
Macromolecule	HydroxyMethylGlutaryl-CoA synthase (protein) Pfam DUF35 (protein) acetoacetyl-CoA thiolase (protein)
Unique Ligands	CL, COA, K, NA, ZN

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6ET9 \| pdb_00006et9	Download File View File

Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A

Engilberge, S., Voegeli, B., Girard, E., Riobe, F., Maury, O., Erb, T.J., Shima, S., Wagner, T.

(2018) Proc Natl Acad Sci U S A 115: 3380-3385

Released	2018-03-14
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Methanothermococcus thermolithotrophicus
Macromolecule	Acetyl-CoA acetyltransferase thiolase (protein) HydroxyMethylGlutaryl-CoA synthase (protein) Pfam DUF35 (protein)
Unique Ligands	CL, GOL, K, MG, NA, TRS, ZN

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6F2F \| pdb_00006f2f	Download File View File

Crystal structure of Protease 1 from Pyrococcus Horikoshii co-cystallized in presence of 10 mM Tb-Xo4 and ammonium sulfate.

Engilberge, S., Riobe, F., Di Pietro, S., Franzetti, B., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Pyrococcus horikoshii
Macromolecule	Deglycase PH1704 (protein)
Unique Ligands	2HA, 7MT, SO4, TB

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6F2H \| pdb_00006f2h	Download File View File

Structure of Protease 1 from Pyrococcus horikoshii co-crystallized in presence of 10 mM Tb-Xo4 and potassium iodide.

Engilberge, S., Riobe, F., Di Pietro, S., Franzetti, B., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Pyrococcus horikoshii
Macromolecule	Deglycase PH1704 (protein)
Unique Ligands	7MT, IOD, TB

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6F2I \| pdb_00006f2i	Download File View File

Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4

Engilberge, S., Riobe, F., DI Pietro, S., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	7MT, ACT, CL, NA, TB

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6F2J \| pdb_00006f2j	Download File View File

Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM sodium sulfate

Engilberge, S., Riobe, F., Di Pietro, S., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	7MT, CL, NA, TB

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6F2K \| pdb_00006f2k	Download File View File

Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM potassium phosphate monobasic.

Engilberge, S., Riobe, F., Di Pietro, S., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, TB

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6F2M \| pdb_00006f2m	Download File View File

Structure of the bacteriophage T5 distal tail protein pb9 co-crystallized with 10mM Tb-Xo4

Engilberge, S., Riobe, F., Di Pietro, S., Breyton, C., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Tequintavirus T5
Macromolecule	Distal tail protein (protein)
Unique Ligands	7MT, CL, EDO, NA, TB

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6FRM \| pdb_00006frm	Download File View File

Crystal Structure of coenzyme F420H2 oxidase (FprA) co-crystallized with 10 mM Tb-Xo4

Engilberge, S., Riobe, F., Wagner, T., Di Pietro, S., Shima, S., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanothermococcus thermolithotrophicus
Macromolecule	Coenzyme F420H2 oxidase (FprA) (protein)
Unique Ligands	7MT, CL, FE, FMN, TB

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6FRN \| pdb_00006frn	Download File View File

Structure of F420H2 oxidase (FprA) co-crystallized with 10mM Tb-Xo4 and calcium chloride

Engilberge, S., Riobe, F., Di Pietro, S., Wagner, T., Shima, S., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Methanothermococcus thermolithotrophicus
Macromolecule	F420H2 oxidase (FprA) (protein)
Unique Ligands	7MT, CA, FMN, GOL, NA, PE4, TB

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6FRO \| pdb_00006fro	Download File View File

Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM potassium iodide.

Engilberge, S., Riobe, F., Di Pietro, S., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	7MT, IOD, NA, TB

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6FRQ \| pdb_00006frq	Download File View File

Structure of tetragonal Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM Potassium sodium tartrate tetrahydrate.

Engilberge, S., Riobe, F., Di Pietro, S., Wagner, T., Shima, S., Girard, E., Dumont, E., Maury, O.

(2018) Chemistry 24: 9739-9746

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, TB

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6H9S \| pdb_00006h9s	Download File View File

Crystal dimeric structure of Petrotoga mobilis lactate dehydrogenase with NADH

Roche, J., Engilberge, S., Girard, E., Madern, D.

To be published

Released	2018-08-22
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Petrotoga mobilis SJ95
Macromolecule	L-lactate dehydrogenase (protein)
Unique Ligands	NAD

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6HA4 \| pdb_00006ha4	Download File View File

Crystal structure of PAF - p-sulfonatocalix[4]arene complex

Alex, J.M., Rennie, M., Engilberge, S., Batta, G., Crowley, P.B.

(2019) IUCrJ 6: 238-247

Released	2019-02-13
Method	X-RAY DIFFRACTION 1.33 Å
Organisms	Penicillium rubens Wisconsin 54-1255
Macromolecule	Pc24g00380 protein (protein)
Unique Ligands	GOL, T3Y

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6HAH \| pdb_00006hah	Download File View File

Crystal structure of PAF - p-sulfonatocalix[6]arene complex

Alex, J.M., Rennie, M., Engilberge, S., Batta, G., Crowley, P.B.

(2019) IUCrJ 6: 238-247

Released	2019-02-13
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Penicillium rubens Wisconsin 54-1255
Macromolecule	Pc24g00380 protein (protein)
Unique Ligands	FWN, FWQ, GOL, NA

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6HAJ \| pdb_00006haj	Download File View File

Crystal structure of PAF - p-sulfonatocalix[8]arene complex

Alex, J.M., Rennie, M., Engilberge, S., Batta, G., Crowley, P.B.

(2019) IUCrJ 6: 238-247

Released	2019-02-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Penicillium rubens Wisconsin 54-1255
Macromolecule	Pc24g00380 protein (protein)
Unique Ligands	7PE, EVB

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6HF6 \| pdb_00006hf6	Download File View File

Crystal structure of the Protease 1 (E29A,E60A,E80A) from Pyrococcus horikoshii co-crystallized with Tb-Xo4.

Engilberge, S., Wagner, T., Santoni, G., Breyton, C., Shima, S., Franzetti, B., Riobe, F., Maury, O., Girard, E.

(2019) J Appl Crystallogr 52: 722-731

Released	2019-06-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pyrococcus horikoshii OT3
Macromolecule	Deglycase PH1704 (protein)
Unique Ligands	7MT, MLI, TB

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6HF7 \| pdb_00006hf7	Download File View File

Crystal structure of the adenylate kinase from Methanothermococcus thermolithotrophicus co-crystallized with Tb-Xo4

Engilberge, S., Wagner, T., Santoni, G., Breyton, C., Shima, S., Franzetti, B., Riobe, F., Maury, O., Girard, E.

(2019) J Appl Crystallogr 52: 722-731

Released	2019-06-19
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Methanothermococcus thermolithotrophicus
Macromolecule	Adenylate kinase (protein)
Unique Ligands	7MT, GOL, MG, TB

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6HK1 \| pdb_00006hk1	Download File View File

Crystal structure of the Thiazole synthase from Methanothermococcus thermolithotrophicus co-crystallized with Tb-Xo4

Engilberge, S., Wagner, T., Santoni, G., Breyton, C., Shima, S., Franzetti, B., Riobe, F., Maury, O., Girard, E.

(2019) J Appl Crystallogr 52: 722-731

Released	2019-06-19
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Methanothermococcus thermolithotrophicus
Macromolecule	Thiazole synthase (protein)
Unique Ligands	48F, GOL, NA, PEG, PGE, TB

1 to 25 of 112 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4KII | pdb_00004kii

5LD9 | pdb_00005ld9

5LDA | pdb_00005lda

5MF2 | pdb_00005mf2

5NGJ | pdb_00005ngj

6EQO | pdb_00006eqo

6ESQ | pdb_00006esq

6ET9 | pdb_00006et9

6F2F | pdb_00006f2f

6F2H | pdb_00006f2h

6F2I | pdb_00006f2i

6F2J | pdb_00006f2j

6F2K | pdb_00006f2k

6F2M | pdb_00006f2m

6FRM | pdb_00006frm

6FRN | pdb_00006frn

6FRO | pdb_00006fro

6FRQ | pdb_00006frq

6H9S | pdb_00006h9s

6HA4 | pdb_00006ha4

6HAH | pdb_00006hah

6HAJ | pdb_00006haj

6HF6 | pdb_00006hf6

6HF7 | pdb_00006hf7

6HK1 | pdb_00006hk1