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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Cerovina, T."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

Homo sapiens (10)

Taxonomy

Eukaryota (10)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (7)
	2.0 - 2.5 (2)

Release Date

	2010 - 2014 (5)
	2015 - 2019 (5)

Enzyme Classification Name

	Oxidoreductases (2)
	Transferases (2)

Symmetry Type

Asymmetric (10)

SCOP Classification

	All beta proteins (1)
	Artifacts (1)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 10 of 10 Structures

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Explore in 3D

3S8S \| pdb_00003s8s	Download File View File

Crystal structure of the RRM domain of human SETD1A

Chao, X., Tempel, W., Bian, C., Cerovina, T., Walker, J.R., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

To be published

Released	2011-06-08
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase SETD1A (protein)
Unique Ligands	UNX

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4FU6 \| pdb_00004fu6	Download File View File

Crystal structure of the PSIP1 PWWP domain

Qin, S., Tempel, W., Xu, C., Wu, H., Dong, A., Cerovina, T., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2014) Trends Biochem Sci 39: 536-547

Released	2012-08-29
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	PC4 and SFRS1-interacting protein (protein)
Unique Ligands	GOL, SO4, UNX

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4HBD \| pdb_00004hbd	Download File View File

Crystal structure of KANK2 ankyrin repeats

Xu, C., Tempel, W., Cerovina, T., El Bakkouri, M., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

To be published

Released	2012-12-12
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Homo sapiens
Macromolecule	KN motif and ankyrin repeat domain-containing protein 2 (protein)
Unique Ligands	UNX

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4O61 \| pdb_00004o61	Download File View File

Structure of human ALKBH5 crystallized in the presence of citrate

Tempel, W., Chao, X., Liu, K., Dong, A., Cerovina, T., He, H., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2014) J Biological Chem 289: 17299-17311

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	RNA demethylase ALKBH5 (protein)
Unique Ligands	CIT, GOL, UNL, UNX

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4OCT \| pdb_00004oct	Download File View File

Crystal structure of human ALKBH5 crystallized in the presence of Mn^{2+} and 2-oxoglutarate

Tempel, W., Chao, X., Liu, K., Dong, A., Cerovina, T., He, H., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2014) J Biological Chem 289: 17299-17311

Released	2014-04-16
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Homo sapiens
Macromolecule	RNA demethylase ALKBH5 (protein)
Unique Ligands	AKG, MN, UNX

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5C0M \| pdb_00005c0m	Download File View File

Crystal structure of SGF29 tandem tudor domain in complex with a Carba containing peptide

Dong, A., Xu, C., Tempel, W., Cerovina, T., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2015) Nat Commun 6: 8911-8911

Released	2015-07-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Carba-containing peptide (protein) SAGA-associated factor 29 homolog (protein)
Unique Ligands	GOL, SO4, UNX

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5TEE \| pdb_00005tee	Download File View File

Crystal structure of Gemin5 WD40 repeats in apo form

Chao, X., Tempel, W., Bian, C., Cerovina, T., He, H., Walker, J.R., Seitova, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2016) Genes Dev 30: 2376-2390

Released	2016-10-19
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Gem-associated protein 5 (protein)
Unique Ligands	GOL, NA, UNX

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5TEF \| pdb_00005tef	Download File View File

Crystal structure of Gemin5 WD40 repeats in complex with m7GpppG

Chao, X., Tempel, W., Bian, C., He, H., Cerovina, T., Seitova, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2016) Genes Dev 30: 2376-2390

Released	2016-10-19
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Gem-associated protein 5 (protein)
Unique Ligands	GOL, GTG, UNX

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5THA \| pdb_00005tha	Download File View File

Gemin5 WD40 repeats in complex with a guanosyl moiety

Chao, X., Tempel, W., Bian, C., Cerovina, T., He, H., Seitova, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2016) Genes Dev 30: 2376-2390

Released	2016-10-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Gem-associated protein 5 (protein)
Unique Ligands	GP3, UNX

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5UPD \| pdb_00005upd	Download File View File

Methyltransferase domain of human Wolf-Hirschhorn Syndrome Candidate 1-Like protein 1 (WHSC1L1)

Tempel, W., Yu, W., Dong, A., Cerovina, T., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Wu, H., Structural Genomics Consortium (SGC)

To be published

Released	2017-02-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase NSD3 (protein)
Unique Ligands	SAM, UNX, ZN

1 to 10 of 10 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3S8S | pdb_00003s8s

Crystal structure of the RRM domain of human SETD1A

4FU6 | pdb_00004fu6

Crystal structure of the PSIP1 PWWP domain

4HBD | pdb_00004hbd

Crystal structure of KANK2 ankyrin repeats

4O61 | pdb_00004o61

Structure of human ALKBH5 crystallized in the presence of citrate

4OCT | pdb_00004oct

Crystal structure of human ALKBH5 crystallized in the presence of Mn^{2+} and 2-oxoglutarate

5C0M | pdb_00005c0m

Crystal structure of SGF29 tandem tudor domain in complex with a Carba containing peptide

5TEE | pdb_00005tee

Crystal structure of Gemin5 WD40 repeats in apo form

5TEF | pdb_00005tef

Crystal structure of Gemin5 WD40 repeats in complex with m7GpppG

5THA | pdb_00005tha

Gemin5 WD40 repeats in complex with a guanosyl moiety

5UPD | pdb_00005upd

Methyltransferase domain of human Wolf-Hirschhorn Syndrome Candidate 1-Like protein 1 (WHSC1L1)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3S8S | pdb_00003s8s

4FU6 | pdb_00004fu6

4HBD | pdb_00004hbd

4O61 | pdb_00004o61

4OCT | pdb_00004oct

5C0M | pdb_00005c0m

5TEE | pdb_00005tee

5TEF | pdb_00005tef

5THA | pdb_00005tha

5UPD | pdb_00005upd