Crystal structure of the KDEL receptor bound to HDEL peptide at pH 7.0
Newstead, S., Braeuer, P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ER lumen protein-retaining receptor 2 | 212 | Gallus gallus | Mutation(s): 0  Gene Names: KDELR2, RCJMB04_8l23 Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for Q5ZKX9 (Gallus gallus) Explore Q5ZKX9  Go to UniProtKB:  Q5ZKX9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5ZKX9 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
THR-ALA-GLU-HIS-ASP-GLU-LEU | 7 | Homo sapiens | Mutation(s): 0  | ||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
OLC Query on OLC | C [auth A], D [auth A], E [auth A], F [auth A], G [auth A] | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate C21 H40 O4 RZRNAYUHWVFMIP-GDCKJWNLSA-N | |||
CO2 Query on CO2 | H [auth B] | CARBON DIOXIDE C O2 CURLTUGMZLYLDI-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 48.02 | α = 90 |
b = 38.03 | β = 95.42 |
c = 62.51 | γ = 90 |
Software Name | Purpose |
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BUSTER | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
xia2 | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Wellcome Trust | United Kingdom | 219531/Z/19/Z |