Cryo-EM structures of a human-cockroach hybrid Nav channel in the presence and absence of the alpha-scorpion toxin AaH2.
Clairfeuille, T., Rohou, A., Payandeh, J.(2019) Science 
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2019) Science 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Sodium channel protein type 9 subunit alpha, Sodium channel protein PaFPC1, chimeric construct | 1,559 | Periplaneta americana, Homo sapiens | Mutation(s): 0  Membrane Entity: Yes  | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q15858 (Homo sapiens) Explore Q15858  Go to UniProtKB:  Q15858 | |||||
PHAROS:  Q15858 GTEx:  ENSG00000169432  | |||||
Find proteins for D0E0C2 (Periplaneta americana) Explore D0E0C2  Go to UniProtKB:  D0E0C2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | D0E0C2Q15858 | ||||
Glycosylation | |||||
Glycosylation Sites: 6 | Go to GlyGen: Q15858-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | B | 5 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G61217QH GlyCosmos:  G61217QH GlyGen:  G61217QH |
Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AJP Query on AJP | O [auth A] | Digitonin C56 H92 O29 UVYVLBIGDKGWPX-KUAJCENISA-N | |||
76F Query on 76F | J [auth A], K [auth A], L [auth A], M [auth A] | (7E,21R,24S)-27-amino-24-hydroxy-18,24-dioxo-19,23,25-trioxa-24lambda~5~-phosphaheptacos-7-en-21-yl (9Z,12E)-octadeca-9,12-dienoate C41 H76 N O8 P SUGLKZVXTGKYMP-QNGDKYGQSA-N | |||
LHG Query on LHG | N [auth A] | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE C38 H75 O10 P BIABMEZBCHDPBV-MPQUPPDSSA-N | |||
Y01 Query on Y01 | I [auth A] | CHOLESTEROL HEMISUCCINATE C31 H50 O4 WLNARFZDISHUGS-MIXBDBMTSA-N | |||
NAG Query on NAG | E [auth A], F [auth A], G [auth A], H [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Task | Software Package | Version |
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RECONSTRUCTION | cisTEM |