8THO

Solution structure of the zinc finger repeat domain of BCL11A (ZnF456)

• PDB DOI: https://doi.org/10.2210/pdb8THO/pdb
• BMRB: 31098

• Classification: TRANSCRIPTION
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2023-07-17 Released: 2024-07-24 
• Deposition Author(s): Viennet, T., Yin, M., Orkin, S.H., Arthanari, H.
• Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 20 
• Conformers Submitted: 20 
• Selection Criteria: all calculated structures submitted 

Literature

Structural and dynamic investigation of DNA-binding by BCL11A reveals a specific role for ZnF6

Viennet, T., Yin, M., Jayaraj, A., Kim, W., Sun, Z.-Y.J., Seo, H.-S., Dhe-Paganon, S., Orkin, S.H., Arthanari, H.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content

• Total Structure Weight: 11.9 kDa 
• Atom Count: 815 
• Modelled Residue Count: 100 
• Deposited Residue Count: 100 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
B-cell lymphoma/leukemia 11A	A	100	Homo sapiens	Mutation(s): 0  Gene Names: BCL11A, CTIP1, EVI9, KIAA1809, ZNF856
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H165 (Homo sapiens) Explore Q9H165  Go to UniProtKB:  Q9H165
PHAROS:  Q9H165 GTEx:  ENSG00000119866

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN (Subject of Investigation/LOI)	B [auth A], C [auth A], D [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 20 
• Conformers Submitted: 20 
• Selection Criteria: all calculated structures submitted 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-07-24 
Deposition Author(s): Viennet, T., Yin, M., Orkin, S.H., Arthanari, H.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	EB002026

Revision History  

• Version 1.0: 2024-07-24
  Type: Initial release