8THO

Solution structure of the zinc finger repeat domain of BCL11A (ZnF456)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 1 mM dithiothreitol90% H2O/10% D2O163 mM6.01 atm298Bruker AVANCE III HD 700
22D 1H-13C HSQC aliphatic137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 1 mM dithiothreitol90% H2O/10% D2O163 mM6.01 atm298Bruker AVANCE III HD 700
32D 1H-13C HSQC aromatic137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 1 mM dithiothreitol90% H2O/10% D2O163 mM6.01 atm298Bruker AVANCE III HD 700
43D 1H-13C NOESY aliphatic137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 1 mM dithiothreitol90% H2O/10% D2O163 mM6.01 atm298Bruker AVANCE III HD 700
53D 1H-13C NOESY aromatic137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 1 mM dithiothreitol90% H2O/10% D2O163 mM6.01 atm298Bruker AVANCE III HD 700
63D 1H-15N NOESY137 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 1 mM dithiothreitol90% H2O/10% D2O163 mM6.01 atm298Bruker AVANCE III HD 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD700
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin3.2Bruker Biospin
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentCcpNmr Analysis2.4.2CCPN
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, and Kollman