Ligand validation:9VPX

MLI: MALONATE ION

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
9VPX_MLI_A_405	52%	38%	0.102	0.886	1.36	1.01	-	-	0	0	100%	1
9VPX_MLI_B_403	48%	36%	0.128	0.914	1.64	0.88	1	-	0	0	100%	1
9VPX_MLI_D_403	45%	37%	0.129	0.9	1.5	0.95	-	-	0	0	100%	1
9VPX_MLI_C_404	43%	39%	0.119	0.874	1.37	0.95	-	-	0	0	100%	1
9VPX_MLI_C_403	41%	39%	0.107	0.843	1.31	1.03	-	-	0	0	100%	1
9VPX_MLI_A_404	41%	38%	0.137	0.893	1.42	0.97	1	-	0	0	100%	1
9VPX_MLI_A_403	39%	40%	0.145	0.896	1.3	0.99	-	-	0	0	100%	1
9VPX_MLI_B_404	27%	41%	0.149	0.842	1.31	0.92	-	-	0	0	100%	1
9VPZ_MLI_D_402	80%	40%	0.068	0.957	1.34	0.96	-	-	0	0	100%	1
9VPY_MLI_B_403	77%	40%	0.071	0.953	1.26	1	-	-	0	0	100%	1
9VQ0_MLI_B_403	75%	37%	0.066	0.936	1.4	1.04	-	-	0	0	100%	1
5XFW_MLI_D_403	74%	42%	0.074	0.945	1.15	1.04	-	-	0	0	100%	1
9VPU_MLI_C_403	71%	37%	0.076	0.935	1.38	1.05	-	-	0	0	100%	1
9M9J_MLI_A_403	100%	38%	0.015	0.999	1.33	1.04	-	-	0	0	100%	1
5VIT_MLI_P_601	100%	34%	0.018	0.997	1.24	1.35	-	1	0	0	100%	1
4X1D_MLI_B_702	100%	9%	0.02	0.999	1.11	3.2	-	5	1	0	100%	1
5INB_MLI_A_401	100%	40%	0.02	0.996	1	1.26	-	1	0	0	100%	1
5J28_MLI_B_401	100%	32%	0.02	0.996	1.29	1.41	-	1	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.