Ligand validation:9VPU

MLI: MALONATE ION

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
9VPU_MLI_C_403	69%	37%	0.076	0.935	1.38	1.05	-	-	0	0	100%	1
9VPU_MLI_B_403	67%	39%	0.088	0.943	1.34	1	-	-	0	0	100%	1
9VPU_MLI_A_405	60%	37%	0.095	0.926	1.36	1.1	-	-	0	0	100%	1
9VPU_MLI_D_403	58%	39%	0.089	0.905	1.3	1.01	-	-	0	0	100%	1
9VPU_MLI_A_403	57%	37%	0.104	0.926	1.4	1.04	-	-	0	0	100%	1
9VPU_MLI_D_405	54%	40%	0.099	0.901	1.28	1.01	-	-	0	0	100%	1
9VPU_MLI_B_404	31%	38%	0.122	0.821	1.32	1.05	-	-	0	0	100%	1
9VPU_MLI_A_404	30%	36%	0.126	0.826	1.37	1.14	-	-	0	0	100%	1
9VPU_MLI_B_405	25%	39%	0.141	0.823	1.33	0.99	-	-	0	0	100%	1
9VPU_MLI_C_404	18%	37%	0.144	0.778	1.34	1.12	-	-	0	0	100%	1
9VPU_MLI_D_404	15%	39%	0.167	0.791	1.32	0.99	-	-	0	0	100%	1
9VPZ_MLI_D_402	78%	40%	0.068	0.957	1.34	0.96	-	-	0	0	100%	1
9VPY_MLI_B_403	76%	40%	0.071	0.953	1.26	1	-	-	0	0	100%	1
9VQ0_MLI_B_403	74%	37%	0.066	0.936	1.4	1.04	-	-	0	0	100%	1
5XFW_MLI_D_403	72%	42%	0.074	0.945	1.15	1.04	-	-	0	0	100%	1
9VPV_MLI_A_403	67%	39%	0.092	0.953	1.36	0.97	-	-	0	0	100%	1
9M9J_MLI_A_403	100%	38%	0.015	0.999	1.33	1.04	-	-	0	0	100%	1
5VIT_MLI_P_601	100%	34%	0.018	0.997	1.24	1.35	-	1	0	0	100%	1
4X1D_MLI_B_702	100%	9%	0.02	0.999	1.11	3.2	-	5	1	0	100%	1
5INB_MLI_A_401	100%	40%	0.02	0.996	1	1.26	-	1	0	0	100%	1
5J28_MLI_B_401	100%	32%	0.02	0.996	1.29	1.41	-	1	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.