Ligand validation:9VPT

MLI: MALONATE ION

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
9VPT_MLI_B_405	60%	39%	0.087	0.912	1.32	0.99	-	-	0	0	100%	0.41
9VPT_MLI_A_403	59%	40%	0.099	0.927	1.32	0.98	-	-	0	0	100%	1
9VPT_MLI_B_403	58%	39%	0.096	0.916	1.36	0.96	-	-	0	0	100%	1
9VPT_MLI_C_403	56%	39%	0.109	0.929	1.34	0.98	-	-	0	0	100%	1
9VPT_MLI_D_405	54%	40%	0.087	0.881	1.33	0.97	-	-	0	0	100%	0.38
9VPT_MLI_C_406	52%	40%	0.097	0.89	1.33	0.97	-	-	0	0	100%	0.28
9VPT_MLI_D_403	51%	39%	0.106	0.898	1.34	0.99	-	-	0	0	100%	1
9VPT_MLI_A_406	50%	40%	0.09	0.869	1.32	0.96	-	-	0	0	100%	0.26
9VPT_MLI_C_405	41%	39%	0.122	0.874	1.33	0.98	-	-	0	0	100%	1
9VPT_MLI_A_405	37%	39%	0.115	0.844	1.32	0.99	-	-	0	0	100%	1
9VPT_MLI_B_404	35%	37%	0.122	0.844	1.35	1.07	-	-	0	0	100%	1
9VPT_MLI_C_404	23%	37%	0.145	0.816	1.39	1.03	-	-	0	0	100%	1
9VPT_MLI_A_404	12%	39%	0.169	0.766	1.38	0.95	-	-	0	0	100%	1
9VPT_MLI_D_404	8%	38%	0.168	0.716	1.34	1.06	-	-	0	0	100%	1
9VPZ_MLI_D_402	78%	40%	0.068	0.957	1.34	0.96	-	-	0	0	100%	1
9VPY_MLI_B_403	76%	40%	0.071	0.953	1.26	1	-	-	0	0	100%	1
9VQ0_MLI_B_403	74%	37%	0.066	0.936	1.4	1.04	-	-	0	0	100%	1
5XFW_MLI_D_403	72%	42%	0.074	0.945	1.15	1.04	-	-	0	0	100%	1
9VPU_MLI_C_403	69%	37%	0.076	0.935	1.38	1.05	-	-	0	0	100%	1
9M9J_MLI_A_403	100%	38%	0.015	0.999	1.33	1.04	-	-	0	0	100%	1
5VIT_MLI_P_601	100%	34%	0.018	0.997	1.24	1.35	-	1	0	0	100%	1
4X1D_MLI_B_702	100%	9%	0.02	0.999	1.11	3.2	-	5	1	0	100%	1
5INB_MLI_A_401	100%	40%	0.02	0.996	1	1.26	-	1	0	0	100%	1
5J28_MLI_B_401	100%	32%	0.02	0.996	1.29	1.41	-	1	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.