UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 9P3K designated by the Author
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9P3K_UDP_C_502 | 59% | 70% | 0.105 | 0.926 | 0.36 | 0.62 | - | 1 | 0 | 0 | 100% | 1 |
| 9P3K_UDP_G_503 | 53% | 66% | 0.116 | 0.916 | 0.49 | 0.62 | - | 1 | 1 | 0 | 100% | 1 |
| 9P3K_UDP_E_502 | 35% | 69% | 0.133 | 0.858 | 0.4 | 0.62 | - | 1 | 1 | 0 | 100% | 1 |
| 9P3K_UDP_A_503 | 32% | 67% | 0.147 | 0.864 | 0.43 | 0.64 | - | 1 | 2 | 0 | 100% | 1 |
| 9P3K_UDP_B_502 | 30% | 69% | 0.146 | 0.854 | 0.42 | 0.6 | - | 1 | 0 | 0 | 100% | 1 |
| 9P3K_UDP_F_502 | 30% | 67% | 0.132 | 0.828 | 0.47 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 9P3K_UDP_D_502 | 13% | 68% | 0.163 | 0.766 | 0.45 | 0.61 | - | 1 | 2 | 0 | 100% | 1 |
| 9P3K_UDP_H_502 | 12% | 67% | 0.176 | 0.773 | 0.47 | 0.62 | - | 1 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 31% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 68% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |














