Ligand validation:9GDJ

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
9GDJ_GOL_A_309	76%	97%	0.073	0.949	0.08	0.27	-	-	0	0	100%	1
9GDJ_GOL_B_302	74%	95%	0.08	0.953	0.1	0.31	-	-	0	0	100%	1
9GDJ_GOL_B_303	72%	91%	0.084	0.952	0.11	0.42	-	-	0	0	100%	1
9GDJ_GOL_B_305	62%	91%	0.099	0.929	0.1	0.41	-	-	0	0	100%	1
9GDJ_GOL_C_305	61%	93%	0.106	0.938	0.1	0.37	-	-	0	0	100%	1
9GDJ_GOL_A_306	60%	95%	0.103	0.928	0.08	0.34	-	-	0	0	100%	1
9GDJ_GOL_C_308	50%	95%	0.118	0.904	0.08	0.32	-	-	0	0	100%	1
9GDJ_GOL_C_311	50%	95%	0.126	0.917	0.1	0.3	-	-	0	0	100%	1
9GDJ_GOL_C_306	48%	92%	0.127	0.909	0.09	0.39	-	-	1	0	100%	1
9GDJ_GOL_C_301	37%	96%	0.145	0.886	0.08	0.31	-	-	1	0	100%	1
9GDJ_GOL_B_304	36%	96%	0.132	0.858	0.08	0.29	-	-	0	0	100%	1
9GDJ_GOL_C_307	33%	97%	0.137	0.854	0.08	0.28	-	-	0	0	100%	1
9GDJ_GOL_B_307	27%	94%	0.161	0.863	0.09	0.35	-	-	1	0	100%	1
9GDJ_GOL_A_311	27%	96%	0.185	0.899	0.08	0.3	-	-	0	0	100%	1
9GDJ_GOL_B_308	27%	97%	0.168	0.87	0.09	0.27	-	-	0	0	100%	1
9GDJ_GOL_A_305	24%	95%	0.177	0.872	0.09	0.31	-	-	2	0	100%	1
9GDJ_GOL_A_310	24%	95%	0.199	0.906	0.08	0.33	-	-	0	0	100%	1
9GDJ_GOL_C_310	22%	95%	0.175	0.855	0.08	0.32	-	-	0	0	100%	1
9GDJ_GOL_C_314	19%	95%	0.175	0.834	0.09	0.33	-	-	1	0	100%	1
9GDJ_GOL_C_312	18%	93%	0.172	0.822	0.09	0.36	-	-	0	0	100%	0.71
9GDJ_GOL_A_308	17%	97%	0.199	0.859	0.07	0.28	-	-	0	0	100%	0.67
9GDJ_GOL_A_312	15%	95%	0.173	0.799	0.09	0.31	-	-	0	0	100%	1
9GDJ_GOL_B_306	13%	95%	0.204	0.838	0.09	0.31	-	-	0	0	100%	0.69
9GDJ_GOL_C_315	12%	97%	0.183	0.788	0.08	0.28	-	-	0	0	100%	1
9GDJ_GOL_A_307	10%	95%	0.19	0.775	0.09	0.33	-	-	0	0	100%	1
9GDJ_GOL_C_309	6%	95%	0.224	0.776	0.1	0.3	-	-	1	0	100%	0.63
9GDJ_GOL_C_313	4%	96%	0.252	0.788	0.07	0.3	-	-	2	0	100%	0.77
9GDJ_GOL_A_313	3%	95%	0.211	0.69	0.09	0.31	-	-	0	0	100%	1
2YGX_GOL_A_1398	100%	61%	0.006	1	0.38	0.93	-	-	2	0	100%	1
5MR6_GOL_B_602	100%	60%	0.012	0.999	0.4	0.92	-	-	0	0	100%	1
5WM2_GOL_A_603	100%	86%	0.011	0.999	0.53	0.16	-	-	0	0	100%	1
5W5T_GOL_D_506	100%	87%	0.014	0.998	0.38	0.26	-	-	0	0	100%	1
3MG3_GOL_A_324	100%	77%	0.015	0.997	0.24	0.58	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.