GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 8YPZ designated by the Author
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8YPZ_GDP_A_1003 | 26% | 23% | 0.161 | 0.86 | 1.21 | 1.93 | 3 | 9 | 4 | 0 | 100% | 1 |
| 8YPZ_GDP_F_3001 | 10% | 24% | 0.201 | 0.802 | 1.23 | 1.87 | 3 | 6 | 5 | 0 | 100% | 1 |
| 8YPZ_GDP_C_1004 | 9% | 21% | 0.202 | 0.796 | 1.22 | 2.02 | 4 | 11 | 2 | 0 | 100% | 1 |
| 8YPZ_GDP_A_1004 | 7% | 24% | 0.198 | 0.759 | 1.21 | 1.89 | 3 | 8 | 7 | 0 | 100% | 1 |
| 8YPZ_GDP_C_1003 | 1% | 23% | 0.216 | 0.629 | 1.23 | 1.95 | 3 | 7 | 1 | 0 | 86% | 1 |
| 8YPZ_GDP_E_1003 | 1% | 21% | 0.287 | 0.698 | 1.3 | 1.94 | 4 | 9 | 6 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 34% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 6EG8_GDP_L_401 | 100% | 28% | 0.013 | 0.999 | 1.16 | 1.75 | 3 | 7 | 3 | 0 | 100% | 1 |
| 2CNW_GDP_F_1001 | 100% | 25% | 0.014 | 0.999 | 1.21 | 1.86 | 4 | 8 | 0 | 0 | 100% | 1 |
| 5V9L_GDP_B_201 | 100% | 35% | 0.013 | 0.998 | 0.98 | 1.53 | 1 | 7 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 28% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
